Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0317 ATGCTACACCAACAGCTGCGGAGACCACCCATTTGCCGGACGGATCGCGCGCCGCCCAGCCCCATCGCCGCGATCTGCCGGCTACCAGCACGCTGCAGGAAGCTCCCCACCTCGAAGCCGCCACGAATGCCGAAGTTTCGCCGCGGGTCACCACATCGTGCGCCATCACCGGCAGCATCCAGCCTAGCAGAGAAGGGGCCAAGTGGGTTCTTGGTTTGGGGCTTCGATGGCTGCTGCAAGCGAGGAAGGAACAAGGCTAATCTGGTGTTACCCCTGATAAAGACACTCACATTCAACATAATTTCTTCTCGTTTGTTTGATCTTGAGCCTGATGGTGGACCGGTTACCACTGAGAAGGAAATCCTTCACAATGTTAGGCTTGTCATGGTTGCTGGACATGACACTTCATCAGTTCTAATCACTTTCATTGTCAGGCTCTTAGCTAATGAACCTGCTATTTGTGCAGAAGTTTTTCAAGAACAGGAAAAGATAGCAAAAGGCAAGCCATCAGGGGAGCCTCTGACATGGGAAGACCTTGCCAAAATGAGATACACCTGGAGAGTCTTCTGGGTTACATCAATGACCCAAATGGACAATAGCATATTCCCAGAACCATCAAAGTTTGATCAAAGTAGATTTGAAGATCAAACATCATCTGTTCCACACTACTGCTTCGTTCCATTTGGAGATGGAGCAAGAATATGTCCAGGATATGAGTTAGCAAGGGTTAAAACTCTAGTGGCAATCCACTACCTAGTGACTAGGTTCAGTTGGAAGCTATGTGCAGGTAATTTCTTCATTAGGGATCCAATGCCAATACACAATCGAGGGCTACCAATTGAAATTTGGCCAATGAAACTTTCTTAG 867 0.4833 MLHQQLRRPPICRTDRAPPSPIAAICRLPARCRKLPTSKPPRMPKFRRGSPHRAPSPAASSLAEKGPSGFLVWGFDGCCKRGRNKANLVLPLIKTLTFNIISSRLFDLEPDGGPVTTEKEILHNVRLVMVAGHDTSSVLITFIVRLLANEPAICAEVFQEQEKIAKGKPSGEPLTWEDLAKMRYTWRVFWVTSMTQMDNSIFPEPSKFDQSRFEDQTSSVPHYCFVPFGDGARICPGYELARVKTLVAIHYLVTRFSWKLCAGNFFIRDPMPIHNRGLPIEIWPMKLS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0317 288 Pfam Cytochrome P450 188 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 Pfam Cytochrome P450 115 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 228 237 IPR017972 GO:0005506|GO:0016705
Dod08g0317 288 PRINTS P450 superfamily signature 226 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS P450 superfamily signature 131 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS P450 superfamily signature 235 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 MobiDBLite consensus disorder prediction 35 64 - -
Dod08g0317 288 PANTHER OS07G0518100 PROTEIN 115 188 - -
Dod08g0317 288 PANTHER OS07G0518100 PROTEIN 186 281 - -
Dod08g0317 288 PANTHER CYTOCHROME P450 26 115 188 - -
Dod08g0317 288 PANTHER CYTOCHROME P450 26 186 281 - -
Dod08g0317 288 SUPERFAMILY Cytochrome P450 99 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 Gene3D Cytochrome P450 189 282 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS E-class P450 group I signature 191 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS E-class P450 group I signature 120 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS E-class P450 group I signature 235 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS E-class P450 group I signature 225 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 PRINTS E-class P450 group I signature 140 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0317 288 Gene3D Cytochrome P450 94 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0317 Dod-Chr8 3309697 3312747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0317 117 256 Cytochrome P450 AT5G45340 34.286 5.00e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0317 - - lja:Lj2g3v3149370.3 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0317 08 3309697 3312747 Dod08g0317 08 3309697 3312747 ECH