Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0295 ATGGGTATCTGTCTCAGTAAAAAAGGATCAGAACCTGAACACAATGGTTACAGTCACAGACATCATCATGGTCGTGGTGGTGGTGTGCACAATCACAAGGGCCGTGAACCCTTTGTGAACCAATCAAAGAACCCTGCTCCTTATCATCATCATCATCATCAACAACAACAACAACAACCACCTTATAGTTTTCCTGAGAAACATGCTCAATCTCATGTTCCTAGGAAGCCCAATACTGTTTCTACCCCAAGCACAAAACCTGTTCACAGGTCAGATACAATTACAATCCTTGGGAAGCCATTGGAGGATGTTAGGCAGTTCTATACCCTTGGGAAGGAATTGGGGAGAGGCCAATTTGGGGTGACTTATCTTTGCACTGAGAATTCAACTGGCTTGAAATATGCTTGCAAGTCAATCTCAAAGAGGAAGCTTGTTAGCAAATCTGATAAGGAGGATATAAAGAGGGAGATTCAGATCATGCAGCATTTGAGTGGACAACCAAACATTGTTGAGTTCAAAGGTGCTTATGAGGATAAGAATTCAGTTCATGTTGTCATGGAGTTATGTGCAGGTGGTGAGCTTTTTGATAGGATCATTGCCAAGGGACACTACAGTGAGAGAGCTGCAGCTTCAATTTGCAGACAGATTGTTAATGTTGTTCATATATGCCATTTCATGGGTGTGATGCATAGGGATCTGAAGCCAGAGAATTTCTTGTTGTCCAGTAAGGATGAAAAGGCACTTCTCAAGGCCACAGATTTTGGCTTATCTGTCTTCATTGAAGAAGGAAAGGTGTATCGGGATATAGTTGGGAGTGCTTATTATGTTGCTCCAGAAGTCCTACATCGTAGATATGGGAAGGAAATAGATATTTGGAGTGCAGGAGTTATATTATATATCTTACTTACTGGTGTGCCTCCATTTTGGGCAGAGAAGGAAAAGGGAATATTTGATGCCATATTAAAAGGTCATATTGATTTTGAAAGTGCCCCATGGCCAAGCATATCTGATAGTGCTAAGGACCTTGTTCGTAAGATGCTTACACAGGATCCAAAGAAACGAATTACTTCTGCTCAAGTTCTTGAGCACCCCTGGATAAGAGAAGATGGAAATGCTTCTGACAAGCCAATAGACAGTGCAGTCCTTTCGAGAATGAAGCAATTCAGAGCAATGAATAAACTGAAGAAACTTGCACTCAAGGTTATTGCTGAAAGTCTTTCCGAAGAAGAGATCCAAGGTTTAAAGGCAATGTTTACAAACATGGATACTGACAAGAGTGGTACAATCACCTATGAGGAACTGAGAGCGGGATTGCATCGACTCGGCTCAAAACTCACTGAAGCTGAAGTGCGGCAGCTTATGGATGCTGCTGATGTGGATGGAAATGGTACTATTGACTACATAGAATTCATCACTGCTACAATGCATAGACACAGGTTAGAAAGAGATGAGCATCTTTTCAAGGCCTTCCAACATTTTGATTCAGACAACAGTGGGTTTATTACTAGAGATGAACTGGAAACAGCCATGAAAGAATATGGTATGGGTGATGAAGCCACAATCAGGGAAATCATATCTGAAGTTGACACAGATAATGATGGTAGAATCAACTATGAAGAATTTTGTACAATGATGAGAAGTGGAACAACTCAACCAGGAGGCAAGTTATTCTAA 1674 0.4122 MGICLSKKGSEPEHNGYSHRHHHGRGGGVHNHKGREPFVNQSKNPAPYHHHHHQQQQQQPPYSFPEKHAQSHVPRKPNTVSTPSTKPVHRSDTITILGKPLEDVRQFYTLGKELGRGQFGVTYLCTENSTGLKYACKSISKRKLVSKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDKNSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEKALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLHRRYGKEIDIWSAGVILYILLTGVPPFWAEKEKGIFDAILKGHIDFESAPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIQGLKAMFTNMDTDKSGTITYEELRAGLHRLGSKLTEAEVRQLMDAADVDGNGTIDYIEFITATMHRHRLERDEHLFKAFQHFDSDNSGFITRDELETAMKEYGMGDEATIREIISEVDTDNDGRINYEEFCTMMRSGTTQPGGKLF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0295 557 Gene3D - 375 548 - -
Dod08g0295 557 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Dod08g0295 557 ProSitePatterns EF-hand calcium-binding domain. 529 541 IPR018247 -
Dod08g0295 557 Gene3D Transferase(Phosphotransferase) domain 1 194 374 - -
Dod08g0295 557 Pfam Protein kinase domain 108 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0295 557 MobiDBLite consensus disorder prediction 74 91 - -
Dod08g0295 557 SUPERFAMILY Protein kinase-like (PK-like) 90 388 IPR011009 -
Dod08g0295 557 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 57 550 - -
Dod08g0295 557 SMART efh_1 449 477 IPR002048 GO:0005509
Dod08g0295 557 SMART efh_1 485 513 IPR002048 GO:0005509
Dod08g0295 557 SMART efh_1 520 548 IPR002048 GO:0005509
Dod08g0295 557 SMART efh_1 413 441 IPR002048 GO:0005509
Dod08g0295 557 ProSiteProfiles Protein kinase domain profile. 108 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0295 557 MobiDBLite consensus disorder prediction 1 93 - -
Dod08g0295 557 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 550 - -
Dod08g0295 557 Pfam EF-hand domain pair 414 474 IPR002048 GO:0005509
Dod08g0295 557 Pfam EF-hand domain pair 484 546 IPR002048 GO:0005509
Dod08g0295 557 Gene3D Phosphorylase Kinase; domain 1 110 193 - -
Dod08g0295 557 ProSitePatterns EF-hand calcium-binding domain. 494 506 IPR018247 -
Dod08g0295 557 SUPERFAMILY EF-hand 406 545 IPR011992 -
Dod08g0295 557 CDD EFh 414 473 IPR002048 GO:0005509
Dod08g0295 557 CDD EFh 485 546 IPR002048 GO:0005509
Dod08g0295 557 CDD STKc_CAMK 107 365 - -
Dod08g0295 557 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Dod08g0295 557 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Dod08g0295 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Dod08g0295 557 ProSiteProfiles EF-hand calcium-binding domain profile. 517 551 IPR002048 GO:0005509
Dod08g0295 557 SMART serkin_6 108 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0295 557 ProSiteProfiles EF-hand calcium-binding domain profile. 481 516 IPR002048 GO:0005509
Dod08g0295 557 MobiDBLite consensus disorder prediction 51 65 - -
Dod08g0295 557 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Dod08g0295 557 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0295 Dod-Chr8 3123741 3128878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0295 48 557 EF-hand Containing Proteins AT4G04720 76.426 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod08g0295 Pkinase 7.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0295 K13412 - gmx:100794852 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0295 08 3123741 3128878 Dod08g0295 08 3123741 3128878 ECH