Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0233 ATGTCAGACCTAGACAGGCAAATAGAGCAGCTGAAGAAGTGCGAGCCACTGAAGGAGTCGGAAGTGAAGGCTCTCTGCCTCAAAGCTATGGAAATCCTCGTCGAAGAGAGCAACGTTCAACGCGTCGACGCCCCCGTCACTATATGCGGTGATATCCATGGTCAGTTTTATGACATGAAAGAGCTATTCAAAGTAGGAGGCGATTGCCCCAAAACAAACTACTTATTCCTTGGGGATTTTGTTGATAGAGGATTTTACTCAGTCGAAACATTTCTGCTTCTGCTGGCTCTTAAGTCAGTACTCAGTATGCTCTATGGTTATGATAGAGCTGTGGTCTTTTTGCTGCGAAGATGTGGCATTAGTGATCAGTGA 372 0.457 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKSVLSMLYGYDRAVVFLLRRCGISDQ* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0233 123 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 99 - -
Dod08g0233 123 Pfam Calcineurin-like phosphoesterase 45 99 IPR004843 GO:0016787
Dod08g0233 123 SUPERFAMILY Metallo-dependent phosphatases 2 99 IPR029052 -
Dod08g0233 123 Gene3D - 1 116 IPR029052 -
Dod08g0233 123 SMART pp2a_7 17 123 IPR006186 GO:0016787
Dod08g0233 123 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 1 99 - -
Dod08g0233 123 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Dod08g0233 123 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0233 Dod-Chr8 2629931 2631271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0233 24 116 Calmodulin-binding Proteins AT5G63870 41.414 1.69e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0233 K15423 - tcc:18593416 194.897