Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0232 ATGGCGTCTTCTTCAGATTCATGGGTGAAGGAATATAATGAAGCACTGAAACTCGCTGATGACATCACTGGCATGATTTCTGAGCTGAGTTCTCTTCCCGCATCTGGACCAGAAACTCAGCGCCATGCATCTGCTATAAGAAGGAAGATTACAATATTAGGGACCAGACTAGATAGCTTGCAATCGCTTTTGTCAAAGCTTCCTGGAAAGCAGCCTATTTCTGAGAAGGAGATGAGTCGCCGCAAGGACATGCTTGCAAATTTGAGATCAAGAGTTAACCAAATGGCTTCCACGTTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGACCAGAAACAAAACCGGATGACATGAGCAGAACCGTTGGGCTGGACAACAGTGGACTTGTTGGACTACAACGGCAAATTATGAAAGAACAAGACCAGGGCCTTGAAAAATTGGAGGAGACAGTAATAAGCACTAAGCATATTGCACTGGCAGTGAATGAAGAGCTGGATCTACACAGTAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGTTGAGGCGGGTGCAGAAGAACTTGGCAATTTTAAATAAACGAACCAAGGGTGGCTGCTCCTGCCTGTGCATGCTTTTATCAGTGGTTGGTATTGTGGCTTTGGTTGTTGTCGTTTGGCTGTTGATTAAATATTTGTAA 699 0.4378 MASSSDSWVKEYNEALKLADDITGMISELSSLPASGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMSRRKDMLANLRSRVNQMASTLNMSNFANRDSLLGPETKPDDMSRTVGLDNSGLVGLQRQIMKEQDQGLEKLEETVISTKHIALAVNEELDLHSRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCMLLSVVGIVALVVVVWLLIKYL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0232 232 SUPERFAMILY t-snare proteins 17 100 IPR010989 GO:0016020|GO:0016192
Dod08g0232 232 SUPERFAMILY SNARE fusion complex 127 197 - -
Dod08g0232 232 Gene3D - 138 200 - -
Dod08g0232 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Dod08g0232 232 Pfam SNARE domain 173 224 IPR000727 -
Dod08g0232 232 PANTHER SYNTAXIN 1 225 IPR045242 -
Dod08g0232 232 SMART tSNARE_6 131 198 IPR000727 -
Dod08g0232 232 CDD SNARE_Qc 139 196 - -
Dod08g0232 232 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0232 1 232 SNARE and Associated Proteins AT1G16240 72.103 1.87e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0232 K08503 - gmx:100782666 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0232 08 2623561 2625707 Dod08g0232 08 2623561 2625707 ECH