Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0222 ATGCCACAACAAGAGTTCAGCAATTGCATCAAAGAACCTCGTCTTGTTGCCAGAAAGTTCTTGGCAAGGCCTCAACATGAAGGTGTTGGAGCTGTTGTAAGAAGAAGCATAGGACGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGCATTGGATGAATTCTCAGTCACTGCTCCTGCTGGTTTTCCAGATCATCCACATAGAGGCTTTGAGACTGTCACATACATGTTGCAGGGAGCTATAACGCATGAAGATTTTGAAGGACATAAGGGAACAATTGAAGCCGGTGATTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCTGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTTCAGCTTTGGATCAACCTTGCTTCAGAACATAAAATGATTGAACCAAGGTATCAAGAAATGTTGAGCAAGGATATAGCAGAAGCTACGAAGGATGGTATAAAAGTTAGAGTTATAGCAGGGGAAGCACTTGGGATCAAGTCTCCAATCTACACAAGGACTCCAACCATGTACTTGGACTTCTCTCTTAAACCTGGAGCACACTTGCAACAACCTATACCAAAATCTTGGAATGCTTTTGTGTATGTCTTGGAAGGAGAGGGTATCTTTGGAAACCAAAAATCTCAGCCTACAACCCCTCACAATATACTTCTTCTTGGTTCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCTACTTAGGTTCATTCTGGTTGGAGGTGAACCACTAGGTGAACCTGTGGTTCAATTTGGACCCTTTGTAATGAACACTCAAGAGGAGATTGACCAAACCATTGATGACTTTGAGAACTTTGCTAATGGATTTGAGAAAGCAAGCCACTGGAGATCTGAAAGTGCAGCTAGCCTTGACTTTTGA 906 0.4338 MPQQEFSNCIKEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFLALDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASEHKMIEPRYQEMLSKDIAEATKDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQPIPKSWNAFVYVLEGEGIFGNQKSQPTTPHNILLLGSGDGLEAWNKSSKLLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENFANGFEKASHWRSESAASLDF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0222 301 Pfam Pirin 33 126 IPR003829 -
Dod08g0222 301 CDD cupin_pirin_N 31 128 - -
Dod08g0222 301 PIRSF Pirin 12 292 IPR012093 -
Dod08g0222 301 PANTHER PIRIN-RELATED 1 299 IPR012093 -
Dod08g0222 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Dod08g0222 301 PANTHER - 1 299 - -
Dod08g0222 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Dod08g0222 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Dod08g0222 301 CDD cupin_pirin_C 176 252 - -
Dod08g0222 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0222 Dod-Chr8 2557541 2561170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0222 13 288 Calmodulin-binding Proteins AT3G59220 58.993 1.17e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0222 K06911 - gmx:100790637 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0222 08 2557541 2561170 Dod08g0222 08 2557541 2561170 ECH
Dod05g0740 05 11431834 11435555 Dod08g0222 08 2557541 2561170 PCT