Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0215 ATGATGCCGAGTGTTAACCCCGTCCCATCAGACAAAGATTCTGAGCCATTTGTTGAAGTTGACCCTACCGGCCGCTATGGTAGATACAGTGAGCTCTTAGGATCTGGTGCTGTCAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATAGAGGTGGCATGGAACCAAGTGAAGCTAAGGAATTTCTGTGATGACCCTGCCATGGTGGATAGGCTTTACTCTGAGGTGAGGTTGCTGAGAAGCCTAACACACAAGAACATCATCGCCCTTTACAGTGTGTGGAGGGATGAGCAAAGGAACACGCTGAATTTCATCACTGAGGTGTGCACTAGTGGGAATTTGAGGGAGTATAGGAAGAAGCACAGGCATGTTTCCATGAAGGCCCTCAAGAAGTGGTCAAAGCAGATTCTGAGAGGGTTGAATTACTTGCACACTCATGAACCCTGCATCATCCACAGGGACCTCAATTGCAGCAATGTGTTTGTCAATGGGAATGTTGGCCAGGTTAAGATTGGCGACTTGGGTTTGGCTGCAACTGTGGCAAAGAATCATTCAGCACATTCAATTCTTGGCACACCAGAATTCATGGCCCCGGAATTATACGATGAACACTACACAGAATTGGTGGACATATACTCATTTGGGATGTGTGTTCTGGAGATGGTGACACTAGAGATTCCTTATAGTGAGTGTGACAATGTTGCAAAGATTTACAAGAAGGTGTCTTCTGGGGTGAGGCCTGATGCACTGACCAAGGTCAAAGATCAAGAGGTGAAGGCCTTCATTGAGAGGTGCCTTGCTCAGCCAAGGGCAAGGCCTTCTGCAGCTGACCTTCTCAAAGACCCTTTCTTTGATGAGCTTGATGATGACGAAAATGAAGACTGTGATTGTTCATACTAA 903 0.464 MMPSVNPVPSDKDSEPFVEVDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPAMVDRLYSEVRLLRSLTHKNIIALYSVWRDEQRNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILRGLNYLHTHEPCIIHRDLNCSNVFVNGNVGQVKIGDLGLAATVAKNHSAHSILGTPEFMAPELYDEHYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPDALTKVKDQEVKAFIERCLAQPRARPSAADLLKDPFFDELDDDENEDCDCSY* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0215 300 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0215 300 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0215 300 SUPERFAMILY Protein kinase-like (PK-like) 21 286 IPR011009 -
Dod08g0215 300 CDD STKc_WNK 25 285 - -
Dod08g0215 300 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 300 - -
Dod08g0215 300 MobiDBLite consensus disorder prediction 1 21 - -
Dod08g0215 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 300 - -
Dod08g0215 300 PIRSF TyrPK_CSF1-R 120 293 - -
Dod08g0215 300 PIRSF TyrPK_CSF1-R 27 133 - -
Dod08g0215 300 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Dod08g0215 300 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0215 Dod-Chr8 2486417 2489234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0215 6 288 MAP Kinase Kinase Kinase AT5G55560 81.979 0.0 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod08g0215 Pkinase 4.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0215 K08867 - jre:108994268 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0712 05 10913052 10914530 Dod08g0215 08 2486417 2489234 PCT