Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0212 ATGGACGCAGCTGCATCCACCACCAACTCCGGTGAACCCCAATCGGGTTCGGAAGATCCGAACCGAAACGGGTCGGGTCAGAACTCTGCAAGGTACAAGCTGATGTCACCGGCGAAGCTTCCGATCTCGAGGGCGGCTTGCATCACGATACCTCCGGGGCTGAGTCCGACGTCGTTTTTGGAGTCCCCTGTGCTCCTTTCCAACATGAAGGTGGAGCCTTCACCGACTACAGGATCCCTTCCAAAACTTCATCAAACACTACACTGTTCTAGGGCTTCTGCTGCATCCACTGCGTTTCCTGTAACCACTGCATCTTTCAATACCTATACTGTTGATGACAGAAAATCAAGCTTCTTTGAGTTTAAACCCCCGAACAGATTGAATATGGTTCCTGCAGACTTCAACAACCATGTAAGGGAACAGTCTAATCAAATAGAAGGTCCAGGAAAATCTCAACCATTTGCCTCCTCACAATTAGTTGAAAGAGATTTAGCAGTTCCTTCTAATGAATTAAGCCTATCATCACCTGTTCAAAAAGTTAGTTCTGGGGCTAATACCCCTGTTGACGTTGATTTGGATGAAGTTAACAACAGAGGTAACACAGCCACTGGACTTCAAGCATCACATGCGGAGGTTAGAGGCAGTGGAGTTTCAGTTGTAGCTGAGAGAGTATGTGATGATGGATATAATTGGAGGAAATATGGGCAGAAGCATGTTAAAGGAAGTGAATTTCCACGCAGCTATTACAAGTGTACACATCCTAACTGTGAAGTGAAGAAGCTATTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAGCCGCCGATATTCTGCCAGGTACGATCATGTCTACAAAGCATCCAATATGTATGGACAGACATCTCATGTAGCTGATCCCAACAGTACTCCAGAGCTGTCCCCTGTAGGAACAAATGATGATAGTCTTGAGGGTACTGGATTTGTTTCAAGCCGGACTAATGATGAGGTCGATGATGATGATCCCTTCTCTAAGAGAAGGAAAATGGAACTTGGAAATGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGGTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTAAGAGGCAATCCTAACCCTAGGAGTTACTACAAATGCACAAATGCTGGTTGCCCTGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTAATAACTACGTATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGTAGCCATGACATGGCAGGACCAGTAGGGGCCGCAGCAACTGGACATACAAGAATCAAGTTAGAAGAAAGTGATACTATTAGCCTTGACCTTGGGATGGGAATTAGCTCAGCTGCTGAAAATAGATCTAATGGGAAAACACTTCTTTCTGAATATGGTGACGCTCAAACTCACACCAGCAACTCCAATTTCAAGTTTGTTCATACCACTACCCCAGCGCCAGTATACTTTGGTGTCCTAAATAACAGCTCAAATTCTTATGGTGCTAGAGATAATAGGAGTGATGGTCCATCTTTAAACCATTCTCCATATCCTTGCTCACAGAACATGGGAAGAATACTAACTGGTCCGTGA 1701 0.4491 MDAAASTTNSGEPQSGSEDPNRNGSGQNSARYKLMSPAKLPISRAACITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPKLHQTLHCSRASAASTAFPVTTASFNTYTVDDRKSSFFEFKPPNRLNMVPADFNNHVREQSNQIEGPGKSQPFASSQLVERDLAVPSNELSLSSPVQKVSSGANTPVDVDLDEVNNRGNTATGLQASHAEVRGSGVSVVAERVCDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYSARYDHVYKASNMYGQTSHVADPNSTPELSPVGTNDDSLEGTGFVSSRTNDEVDDDDPFSKRRKMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAGPVGAAATGHTRIKLEESDTISLDLGMGISSAAENRSNGKTLLSEYGDAQTHTSNSNFKFVHTTTPAPVYFGVLNNSSNSYGARDNRSDGPSLNHSPYPCSQNMGRILTGP* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0212 566 MobiDBLite consensus disorder prediction 306 325 - -
Dod08g0212 566 MobiDBLite consensus disorder prediction 1 30 - -
Dod08g0212 566 SUPERFAMILY WRKY DNA-binding domain 377 445 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 SUPERFAMILY WRKY DNA-binding domain 221 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 Pfam WRKY DNA -binding domain 386 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 MobiDBLite consensus disorder prediction 536 566 - -
Dod08g0212 566 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 SMART WRKY_cls 385 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 22 546 - -
Dod08g0212 566 ProSiteProfiles WRKY domain profile. 380 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 ProSiteProfiles WRKY domain profile. 220 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 MobiDBLite consensus disorder prediction 331 351 - -
Dod08g0212 566 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 546 IPR044810 GO:0003700
Dod08g0212 566 Gene3D WRKY domain 217 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0212 566 Gene3D WRKY domain 370 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0212 Dod-Chr8 2451107 2457890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0212 35 566 WRKY Transcription Factor Family AT4G26640 53.986 3.10e-177 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g0212 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0212 - - gmx:100816583 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0711 05 10887524 10894040 Dod08g0212 08 2451107 2457890 PCT