Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0210 ATGCAAACGTCTGAGGAACACAAAATGCCGTACTCTTATGGCTCCAGCAGGTTCTCAATTGAGCCTGTGCAAAATCTGGAGCCATGTTGCTTCTTGCCAAGTGAGAACCTAGACAAATACTCACCCTCTTACAACAGCAATCAAGCAACCTACCCTTCACTTCATACTTTAGAACAATATTGCACCCTTGAATCTTCTTCCACCATTAGTTTCCCTTGTGAGAATTCTCCATCTGCAGTTAGTTTCTCACCTAACAATAGTCCAGTGTCCAAACAACAGCAAAGATCATATGTGTTAAGGTCAATAGAACATTCTGCTGAAATTGTTAACTGTTCACAAGACAATGAGTCTTGCTTGACACATGAACAAGATGACTTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTATGCTGGGATCTGATTCTGATACTGTGATCCCCCAAGAATATGATTCTAATTTGTTGGAGGCAGAGAAGTGGAATAAAATGATGGAGGTGATTTCTAGAGGGGACTTGATAGAGATGATTTGTACTTGTGCAAATGCAGTGGCAGAGAATGATATGAAGACAACTGAATGGTTGATGTCTGAGTTGCAAAAAATGGTGTCCGTTTCCGGGAACCCGGTCCAAAGATTGGGGGCATACACGTTGGAGGCTCTTGTTGCAAGGCTAGCCTCTTCAGGAAGCACAATCTACCAATCCTTGAAATGTAAAGACCCCAAATGTAATGAACTCCTTTCATACATGCATCTGCTTTATGAAATCTGTCCATACCTCAAATTTGGGTACATGTCAGCAAATGGATCAATTGCTGAAGTCATGAAGGAGGAAAGTAAAGTCCACATAATCGATTTTCAGATTAATCAGGGAATCCAGTGGGTGAGCCTCATAAAAGCTCTTGCTGGAAGACCTGGAGGACCTCCAAAGATTAGAATAACAGGTGTTGATGACTCTAGTTCTGCTTATGCTAGGGGAGGGGGGCTTAATATAGTTGGAGAAAGGTTATCAAGACTTGCACAGTCATGTAAGGTACCCTTTGAGTTCCATGCTATAGAAGTTGCTCCTTCTGAGGTGCAACTTGGAGACCTTGAACTTAGACCTGGTGAAGCCATTGCTGTGAATTTTGCCATGATGCTGCACCATGTACCAGATGAGAGTGTGGACAATCGGAATCATCGCGACCGGTTGTTGAGGTTGGCAAAGTTCTTGTCTCCTAAGGTAGTGACTCTGGTTGAGCAAGAATCAAACACAAGTAGCATACCATTCTTCCCCCGTTTTGTTGAGACAATGAATTACTACCTGGCTGTTTTTGATTCAATTGATGTTGCTCTTCCAAGGGATCACAAAGAGAGGATTAATGTGGAACAACATTGTTTGGCAAGAGAAGTTGTTAATTTAGTTGCATGTGAAGGGGCTGAAAGAGTAGAACGCCATGAGCTTCTGAAAAAGTGGAGATCACGTTTCGCAAGGGCTGGATTCACACCATATCCCTTGAGCTCTTATGTTAATTCTTCAATCAAGAGTCTTCTGCAAAGCTACCCTGGACACTACACTTTAGAAGAGAGAGACGATGCTCTATATCTTGGTTGGAAGAATCAAGTTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1629 0.426 MQTSEEHKMPYSYGSSRFSIEPVQNLEPCCFLPSENLDKYSPSYNSNQATYPSLHTLEQYCTLESSSTISFPCENSPSAVSFSPNNSPVSKQQQRSYVLRSIEHSAEIVNCSQDNESCLTHEQDDLRHKIRELESAMLGSDSDTVIPQEYDSNLLEAEKWNKMMEVISRGDLIEMICTCANAVAENDMKTTEWLMSELQKMVSVSGNPVQRLGAYTLEALVARLASSGSTIYQSLKCKDPKCNELLSYMHLLYEICPYLKFGYMSANGSIAEVMKEESKVHIIDFQINQGIQWVSLIKALAGRPGGPPKIRITGVDDSSSAYARGGGLNIVGERLSRLAQSCKVPFEFHAIEVAPSEVQLGDLELRPGEAIAVNFAMMLHHVPDESVDNRNHRDRLLRLAKFLSPKVVTLVEQESNTSSIPFFPRFVETMNYYLAVFDSIDVALPRDHKERINVEQHCLAREVVNLVACEGAERVERHELLKKWRSRFARAGFTPYPLSSYVNSSIKSLLQSYPGHYTLEERDDALYLGWKNQVLVASCAWR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0210 542 ProSiteProfiles GRAS family profile. 163 542 IPR005202 -
Dod08g0210 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 541 IPR005202 -
Dod08g0210 542 Pfam GRAS domain family 173 542 IPR005202 -
Dod08g0210 542 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 19 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0210 Dod-Chr8 2441743 2446427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0210 53 542 GRAS Transcription Factor Family AT1G50600 60.521 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod08g0210 GRAS 9.8e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0210 - - gmx:100779977 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0708 05 10873084 10876526 Dod08g0210 08 2441743 2446427 PCT