Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0196 ATGAGCAGGGCCAAGGCTAGACTTGAGGAACTACATAGAGAGATTGATAGGATATTGCAAGACATTATGGATGAACACAAGAATAGAAATAAAAGCGGCCACTATGAATTCGAAGGAGGTGAAGATCTAGTTGATGTTCTTCTCAAGCTTCAACAGGAAATGGACTCGGAGTATCCCTTGACTGATGACAACATTAAAGCGGTCATCCATGACATGTTCGCTGGTGGTGGCGAAACATCGTCTACTGCTGTGGAGTGGGCAATGGCAGAAATGACAAAGAACCCAAAGGTGATGGAAGCGGCACAAGCTGAGGTAAGAAGGCTATTTTCTGGCAAGGGGAATGTTGATGAATCAGAGTTGCACCAATTGACATACTTAAAGTGTGTCATCAAAGAAACCTTGAGGCTACACCCATCTGTGCCATTGTTAATTCCAAGGGAGAATAGGGAGAGATGCCAAATCAAGGGATACAACATACCAGCTAAGTCTAAGGTCATTATCAATGCTTGGGCAATTGGAAGAGATCCAAAGTATTGGACTGATGCTGAGAGTTTCATACCAGAGAGATTTCTTAACAGCACAATTGATTATAGAGGCACAAATTTTGAATACGTCCCATTTGGTGCTGGAAGGAGGATGTGCCCTGGCATTGCATTTGCTACACCAAACATGGAGCTACCACTTGCCCAATTGCTTTACCATTTTGATTGGAAACTCCCCAATGGAATGAAGCATGAAGAACTAGACATGACTGAGTCATTTTGGTTTACTATAAAAAGAGAAAACGACCTCTGCTTGATTCCCATTACTCATCAACCTTAA 822 0.4246 MSRAKARLEELHREIDRILQDIMDEHKNRNKSGHYEFEGGEDLVDVLLKLQQEMDSEYPLTDDNIKAVIHDMFAGGGETSSTAVEWAMAEMTKNPKVMEAAQAEVRRLFSGKGNVDESELHQLTYLKCVIKETLRLHPSVPLLIPRENRERCQIKGYNIPAKSKVIINAWAIGRDPKYWTDAESFIPERFLNSTIDYRGTNFEYVPFGAGRRMCPGIAFATPNMELPLAQLLYHFDWKLPNGMKHEELDMTESFWFTIKRENDLCLIPITHQP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0196 273 PRINTS P450 superfamily signature 75 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS P450 superfamily signature 205 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS P450 superfamily signature 128 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS P450 superfamily signature 214 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PANTHER CYTOCHROME P450 71D10 1 271 - -
Dod08g0196 273 Gene3D Cytochrome P450 1 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 Coils Coil 1 28 - -
Dod08g0196 273 Pfam Cytochrome P450 6 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PANTHER CYTOCHROME P450 71B11-RELATED 1 271 - -
Dod08g0196 273 PRINTS E-class P450 group I signature 64 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS E-class P450 group I signature 84 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS E-class P450 group I signature 204 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS E-class P450 group I signature 214 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS E-class P450 group I signature 127 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 PRINTS E-class P450 group I signature 168 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 SUPERFAMILY Cytochrome P450 5 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g0196 273 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 207 216 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0196 Dod-Chr8 2034988 2037314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0196 1 268 Cytochrome P450 AT3G26300 44.815 5.61e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0196 - K23806 lja:Lj5g3v2240830.1 415.616