Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0185 ATGAGGTTATCCGTTTTTGAAGCTTTTGTTTTGGTTTTCATTGTTTTATCGTTAGTGAGTGTTGTGGTACAAGGTGGTGATAGTGATGATGATTATGCTAGAAACTTCATTACTTGGGATGACTTCATGGTCAATGAGCAAAGTCTCTCCGGCAATGTTGGTGGTCGAGTTATCGTGGTCGATCAGGGTGGTAATGGAGATTCAACCACCATTCAAGGGGCTGTGGACATGGTTCAGGAAAACAACACACAAAGGGTCAAGATACATATTTATCCCGGAACTTATAGAGAAAGAGTGCATGTGCCGATAAGCAAGCCGTTTATTTCATTTATAGGTAAACCTAACATAACAATCAATGCCAGTGCACTAAAAAATATAACGGCCAATGCAAATGCACTAAATGTAACAGACATTGCGAATGCCTTGCCTGTAATTACAAATAGTACTAAGGCTTCGGACAAAGGTTCAGACGGCCAAGCAATGGGCACGGTTAGTACAGCGACTGTTTGGGTAGAATCTGATTTCTTCTGCGCAACTGCTCTTACTATTGAGAATTTGGTAGATAAAGATGCAGATAGACGTCAAGCAGTGGCCTTGCGGGTAGATGGTGACAAAGCTGTCTTCTACCGAGTTAGGCTTGTTGGGGAGCAGGACACCCTCCTAGATAACACAGGAACCCATTATTTCTACCGAAGTTACATTCAAGGATCCGTTGATTTCATATGTGGCCAAGCAAAATCACTGTTTCATCAGGAGTGTATACTATACTCAGTAGCAGAGTTTTGGGGAGCAATTGCAGCTCATCACAGGGATTCAGTTGATGAAGATACAGGATTCTCATTTGTTGGTTGCACAATCAAAGGAAATGGTAGTGTCTTGCTTGGGAGAGCTTGGGGAGACTATGCAACAACAATATATTCCTACTGTGACATGGATGATATCATTGACCCCATGGGATGGAGTGATTGGGATGTTCCTTCTAGACAAGAGACAGCCATGTTTGGGGAGTACCAGTGCTATGGAAAAGGATCAAATAGAACTGGGAGGGTGGAATGGTCAAAAGTTTTGAGCAGTGAGGAAGCCAGGCCTTTCCTTGGCAGAGACTACATAAATGGAGACAAATGGCTTAGACTATAA 1137 0.4274 MRLSVFEAFVLVFIVLSLVSVVVQGGDSDDDYARNFITWDDFMVNEQSLSGNVGGRVIVVDQGGNGDSTTIQGAVDMVQENNTQRVKIHIYPGTYRERVHVPISKPFISFIGKPNITINASALKNITANANALNVTDIANALPVITNSTKASDKGSDGQAMGTVSTATVWVESDFFCATALTIENLVDKDADRRQAVALRVDGDKAVFYRVRLVGEQDTLLDNTGTHYFYRSYIQGSVDFICGQAKSLFHQECILYSVAEFWGAIAAHHRDSVDEDTGFSFVGCTIKGNGSVLLGRAWGDYATTIYSYCDMDDIIDPMGWSDWDVPSRQETAMFGEYQCYGKGSNRTGRVEWSKVLSSEEARPFLGRDYINGDKWLRL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0185 378 Pfam Pectinesterase 154 373 IPR000070 GO:0030599|GO:0042545
Dod08g0185 378 Pfam Pectinesterase 58 128 IPR000070 GO:0030599|GO:0042545
Dod08g0185 378 Gene3D - 56 378 IPR012334 -
Dod08g0185 378 SUPERFAMILY Pectin lyase-like 55 376 IPR011050 -
Dod08g0185 378 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 378 - -
Dod08g0185 378 PANTHER PECTINESTERASE QRT1 14 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0185 Dod-Chr8 1902393 1905218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0185 1 330 Carbohydrate Esterase AT5G55590 49.441 5.79e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0185 K01051 - gmx:100812850 608.986