Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0184 ATGATGATGATGATGATGGGGTTGTCTTATAGAGTCATGATCTTGTTTGTTTTGTTTTTCATGATGAGGGTTCAGGTGGATTTAGCAGAAGGTTACAATATCAATGGCCATGTTCATGTTAAGAATTACATTGGTTGGGAAGATTTGCAGGAAGGTGGCAATAGCAATAGCAATGGCCATGTTCATGTTAAGAATTACATTAGTTGGGAAGATTTGCTGGTGGATGATGGGGAAAGGTTGGCCTTGAGATCTAACAACGAGGTTCGAGTTATTGTGGTTGATCAACATGGAGGAGGACATTCCGAAACTGTTCAAGGGGCTGTGGATATGGTTCCAGATCACAACAAAGAGAGGGTCAAAATCTACATTTTTCCAGGCATTTATAGGGAAAAAGTGCTTGTGCCAAGCACCAAGCCTTATATTTCATTTATAGGTAAAAGAAATGAAACAGCAGGTGCTGTAATTACTTGGGACAGCAAATCATCTGATAGGGGCCCAAATGGCCAAACATTGGGCACTTATGGTTCAGCAACTGTGGGAGTAGACTCAGATTATTTCTGCGCAGCTGAGATCACTTTTGAGAACTCAGTAGTTGCAGTGCCTGGTGGAAAAGGAATGCAAGCGGTGGCCTTGAGGGTAAACAGTAATAGAGCTATGTTCTATAGAGTTAAGATCAAAGGAACACAGGACACTCTCTTAGACAACACAGGAACTCATTACTTCTACAAGTGTTACATCCAAGGAAAAATTGATTTCATCTTTGGCCGTGCAAAATCACTCTATGAGAAATGTCATCTTCAGTCAATAGCTGAGAACTTTGGAGCAATTGCAGCACACCACAGGGATTCACCAGAGCAAGACACAGGCTTCTCTTTTGTAGGGTGCAGGATTAGAGGCACTGGCAATGTGTACCTTGGTAGAGCATGGGGGAACTACTCCAGAGTGATATATTCCAATTGTTACATGGATGATATTATCAATCCTCAAGGGTGGTCTGAATGGAATCATCCAGACAGAAAAAGGACTGCAGTGTTTGGTGAGTATCTGAACCATGGAAAAGGAGCAGATAGAAGACAAAGGGTACCTTGGTCAAAATCATTCAACTATGGGGAAGCAAGGCCTTTCTTGGACAAGAGCTTCATAAATGGAGATCAGTGGCTTAGACTGTAG 1170 0.4214 MMMMMMGLSYRVMILFVLFFMMRVQVDLAEGYNINGHVHVKNYIGWEDLQEGGNSNSNGHVHVKNYISWEDLLVDDGERLALRSNNEVRVIVVDQHGGGHSETVQGAVDMVPDHNKERVKIYIFPGIYREKVLVPSTKPYISFIGKRNETAGAVITWDSKSSDRGPNGQTLGTYGSATVGVDSDYFCAAEITFENSVVAVPGGKGMQAVALRVNSNRAMFYRVKIKGTQDTLLDNTGTHYFYKCYIQGKIDFIFGRAKSLYEKCHLQSIAENFGAIAAHHRDSPEQDTGFSFVGCRIRGTGNVYLGRAWGNYSRVIYSNCYMDDIINPQGWSEWNHPDRKRTAVFGEYLNHGKGADRRQRVPWSKSFNYGEARPFLDKSFINGDQWLRL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0184 389 Gene3D - 89 389 IPR012334 -
Dod08g0184 389 PANTHER PECTINESTERASE QRT1 62 389 - -
Dod08g0184 389 SUPERFAMILY Pectin lyase-like 90 387 IPR011050 -
Dod08g0184 389 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 389 - -
Dod08g0184 389 Pfam Pectinesterase 91 384 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0184 Dod-Chr8 1897688 1899507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0184 6 341 Carbohydrate Esterase AT5G55590 53.274 2.13e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0184 K01051 - gmx:100804220 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0184 08 1897688 1899507 Dod08g0184 08 1897688 1899507 ECH