Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0177 ATGGCGAACACCGAAGCAAAGGAGCCCTTGTTGTTGGGATCACCAGATCCTGAAGCTCAAAAGGATAAAAGGCAGTTACACAAGAGAAGATTCCTCCGTTCTAGAAGTGCTCCTTGCCATCCTCATGAGACAAATGGCAATGCATCAATTCCACGATCTGTGTCCATACTTGGGAATTTACATCCAAGCTTTAAAAAAGTGGCTATGTACCTTGCAGTGTATTTAGGTGTAGGAGCTGTAATATTCTACCTAGTCAGGAACCAGATCAAGGGGATGAAGACAGACGGGGTTCTTGACGCCGTATATCTTACAATTGTGACGATGACCACTGTTGGATACGGAGACCTTGTGCCCAACAGTAACCTCACGAAACTACTTGCATGTGCTTTTGTTTTCTCTGGAGTGGCATTGGTTGGACTAATCCTAAGCAAAGCAGCAGACTACTTGGTTGAGAAACAGGAAGTTTTGCTAGTTAAAGCTATGAACATGCACCGAAAGGCTGGTACAAGACAAATTCTAAAGGAGGTTGAGGTGAATAAAACAAGATACAAATTTCTTTTGGCCTTCATCCTTCTCGCGATTCTCATTATTGCAGGGACGGTTTTCTTGGTAACCGTAGAGAAACTGAGTTTCATTGATGCCTTCTACTGCGTTTGTTCTACACTTACAACCCTTGGTTATGGGGATAAAAGTTTCTCAACTCAAGCAGGAAGAGTCTTTGCTGTGTTTTGGATATTGGCAGGTACCATCTCTTTAGCTCAGGTCTTCCTATACATTGCTGAGCTTAACACGGAAAGCAGACAAAAGGCGATCGTCAACTGGGTTCTTACAAGGAAGATGACCAATTTAGACTTGGAGATAGCAGATATTGATGAGGATGGGACTGTTGGGTTAGTCGTGCATTCTTTCAAAGCCTTATTGTTTGGCAGTTTATATTACTATCAATGA 948 0.4262 MANTEAKEPLLLGSPDPEAQKDKRQLHKRRFLRSRSAPCHPHETNGNASIPRSVSILGNLHPSFKKVAMYLAVYLGVGAVIFYLVRNQIKGMKTDGVLDAVYLTIVTMTTVGYGDLVPNSNLTKLLACAFVFSGVALVGLILSKAADYLVEKQEVLLVKAMNMHRKAGTRQILKEVEVNKTRYKFLLAFILLAILIIAGTVFLVTVEKLSFIDAFYCVCSTLTTLGYGDKSFSTQAGRVFAVFWILAGTISLAQVFLYIAELNTESRQKAIVNWVLTRKMTNLDLEIADIDEDGTVGLVVHSFKALLFGSLYYYQ* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0177 315 MobiDBLite consensus disorder prediction 1 25 - -
Dod08g0177 315 Gene3D - 61 155 - -
Dod08g0177 315 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 23 296 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod08g0177 315 SUPERFAMILY Voltage-gated potassium channels 176 278 - -
Dod08g0177 315 SUPERFAMILY Voltage-gated potassium channels 63 163 - -
Dod08g0177 315 Gene3D - 165 276 - -
Dod08g0177 315 PRINTS Two pore domain K+ channel signature 223 232 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod08g0177 315 PRINTS Two pore domain K+ channel signature 106 134 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod08g0177 315 Pfam Ion channel 70 150 IPR013099 -
Dod08g0177 315 Pfam Ion channel 191 262 IPR013099 -
Dod08g0177 315 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 23 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0177 Dod-Chr8 1863410 1864357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0177 51 306 Ion Channels AT5G55630 60.232 1.34e-113 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0177 K05389 - gmx:100777388 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0177 08 1863410 1864357 Dod08g0177 08 1863410 1864357 ECH