Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0166 ATGGTGCATCTGAACCACACAAGAACGGCGTGGTCGGCCTTCACACGCGCCGTCGACGTCCCCACCACAAGCTCCGGCGCCCTCCTCTACGACAACCCCATCTCCCTCTTCGACCAAACCTCCTTCTCCACCTCCTTCTCCTTCTCCATCACCAACCTCAACCCTTCCTCCTTCGGCGACGGCATCGCCTTCTTCCTCTCCCCTGCCAACACCACCACCACCCTTCCCGGCGGCGGCACCCTCGGCCTACCCGCCGCCACCTTCGTCGCCGTCGAGTTCGACACTCGCCAAGACCCTTCTTTCCACGACCCTAACGAGAACCACGTAGGTTTCAACGTGAACTCCTTGAACTCAATCACCACCGTTGATCCCATCACTCACGGCATTGATCTCAAGAGTGGCAACACCATCACCTCTTGGATAGACTACAACGGTGAGAAAAGAATCCTCACAGTGTTCTTGAGTTACTCTTTTTCTTCCAAGCCTTTAAACCCTGTCCTCATCGTTCGTGGTGTCGATCTTTCGAAGCAGTTCAAGGACAACAAGGTTTATGTAGGGTTCTCAGCTTCAACAGAAGGAAGCACTGAACTTCACATGATCGAGAGATGGAGCTTTAGGAGCTTCGGTTTTGTCCCTGCAAGACAGCATCTGAGCCCTCACAATGTTTCTGATAACACTGTTGGTGTAACAGTGGGTAGTGATGTTGATGTTAATGCTAACAACAACAAGGGCGGTCTTCTTCCTCACAACAAGAGGCTTGGGATTGGTGTTGCTGTTGCGGGCCCTGCTTTCTTCTTTGTGGTGTTCTCGATCTTGGGGTATGTTACTGTTAGAAAATGGAGAGGAAACAATAACAATGGGAATCAGAAGAAGGGTTTCAAGGCTGAGTCCTTTGTGGCGTGTCCTAGGGAGTTTGATTACAAGGAGTTGAAGATTGCAACTAGGGAGTTTCACCCCAGTAGGATCGTTGGACATGGTTCATTTGGGACTGTGTATAAAGCATTCTTTATGTCTTCCGGGACCATTGCTGCTGTTAAGAGATCGAGGCATTCCCATGAAGGGAAAACTGAGTTCCTGGCTGAGTTGTCAATCATTGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTACAAGAGGACGAGGTCTGA 1146 0.5052 MVHLNHTRTAWSAFTRAVDVPTTSSGALLYDNPISLFDQTSFSTSFSFSITNLNPSSFGDGIAFFLSPANTTTTLPGGGTLGLPAATFVAVEFDTRQDPSFHDPNENHVGFNVNSLNSITTVDPITHGIDLKSGNTITSWIDYNGEKRILTVFLSYSFSSKPLNPVLIVRGVDLSKQFKDNKVYVGFSASTEGSTELHMIERWSFRSFGFVPARQHLSPHNVSDNTVGVTVGSDVDVNANNNKGGLLPHNKRLGIGVAVAGPAFFFVVFSILGYVTVRKWRGNNNNGNQKKGFKAESFVACPREFDYKELKIATREFHPSRIVGHGSFGTVYKAFFMSSGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQEDEV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0166 381 ProSitePatterns Protein kinases ATP-binding region signature. 323 346 IPR017441 GO:0005524
Dod08g0166 381 SUPERFAMILY Protein kinase-like (PK-like) 300 377 IPR011009 -
Dod08g0166 381 Pfam Protein kinase domain 318 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0166 381 PANTHER - 13 377 - -
Dod08g0166 381 Gene3D Phosphorylase Kinase; domain 1 278 377 - -
Dod08g0166 381 Gene3D - 7 216 - -
Dod08g0166 381 ProSitePatterns Legume lectins beta-chain signature. 89 95 IPR019825 -
Dod08g0166 381 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 13 377 - -
Dod08g0166 381 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 209 IPR013320 -
Dod08g0166 381 CDD lectin_legume_LecRK_Arcelin_ConA 18 209 IPR001220 GO:0030246
Dod08g0166 381 ProSiteProfiles Protein kinase domain profile. 317 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0166 381 Pfam Legume lectin domain 22 209 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0166 Dod-Chr8 1788387 1792210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0166 5 377 Receptor kinase-like Gene Family AT5G55830 50.886 2.71e-112 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod08g0166 Lectin_legB 1.2e-50 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0166 - - adu:107496163 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0166 08 1788387 1792210 Dod08g0166 08 1788387 1792210 ECH