Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0144 ATGGAAAATGGGAGAAAGGATGAGATTGAGGACATGTCAATGTCACCCCCATCCGTTGGTTCCATGCAGATAGCTGGAAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATATCTTCCCAATAAGTACTCAGAGATTGTCCTTAAAGTTGAGGATTCCAGCATCAACCAAGATCCCCCACTCCCCATATATCTCAAGTTTGAGGATGTAGAGTTCAAGGTGAAAAATAGCCAAGCTGCTTCCGATAACCCTGTGAAGACAATGATGTCAAAGGTGGCCACACAGCTCATGGAAGAAGATAAATACAAGAAAATCTTAAAGGGTATCACAGGAAGCATTGGCCCTGGCGAGATTCTTGCTTTGATGGGTCCTTCTGGAAGTGGAAAGACAACCTTGTTGAGAGTGGTAGGAGGAAGATTACTTGACACCGTGAAGGGAAAGATTACTTATAATGGTGTTAGATATAATCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTTCCAACCAACATGACTAAGCAACAAAAATATGCGAGAGTGGAGACCACAATCAAGGAACTAGGCCTTGAAAGATGTCGGCACACAAAAATAGATGGAGGATTTCTCAAAAGCATATCAGGAGGAGAAAGGAAGAGAACTAGCATAGGCTATGAAATTCTTGTTGATCCTTCACTGCTCCTTCTTGATGAACCAACTTCAGGCCTTGATTCCACCTCGGCCAACAAACTCCTCCTAACTCTGCAGGGACTAGCCAAGGGTGGAAGGACCATAATCACTACAATTCACCAACCATCTAGCAGAATCTTCCATATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCTGTTTACTATGGGAAGGCTAGAGACTCAATGGAGTACTTTTCATCCTTGCAGTTCATCCCGGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCGACAGGTCAAGTGAATGACATAAGTGTTCCTCAAGATATTTTGAAAGATCAAGAGTTTGCTGACCCTTCAAAAGCTCTTATAAAATATCTAAAACTCAAGTATAAAGACATATTGGAGCCAAAAGAAAAAGAAGAGAATCATGGAGCAGCAAACACACCAAAACATCTTCAGCTAGCTATTCAGGTTAAGAAGGAGTGCACATTGAGTTGGTTGGAACAATTCATTATTCTTTACAAGAGAACATTCAGATCAAGATGCAAGGACTACTTTGATAAATTAAGACTAGTTCAAGCCCTTGGAATTGCACTTGTGTTGGGGCTACTTTGGTGGAAATCTTCAACCAATACTGAGGCTCAACTAAGAGATCAGGTTGGTTTAATGTTCTATATCTGTATATTTTGGACATCTTCATGTATTTTCGGAGCAGTCTACGTCTTTCCATTTGAAAAGGTCTACTTGGTGAAAGAAAGGAAAGCAGACATGTACAGATTAAGTGTGTACTATGCATGCAGCACTCTGAGTGACATGGTGGCGCATGTTTTCTATCCAACCTTTTTCATGGTTATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGCTTCTTCTTGACCTTGTTCACAGTGTTGTTAATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGGGCTGGGATGGTTGCTTCTTTGATACTGATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAGTGGCTGAAGTATTTATCATTCATGTACTATGGGTTCAGGCTGCTTCTAAAAGTGCAGTATTCAGGAGACCAACTATATGAGTGTGAGAGCATAGAAGGGTGCAAGACCTTGCAGAGTTCACCTTCATTTGACACTGTGAACTTGAAAGGAGGCTTACAAGAAGTTTGGGTTCTCATGGCCATGGCACTGTGCTTCCGGTTGCTTGCTTACTTCTGTCTACGCAGAAAAATTGATGCATGCAGTTAG 2058 0.4189 MENGRKDEIEDMSMSPPSVGSMQIAGSNGFGHSMEFMSQAYLPNKYSEIVLKVEDSSINQDPPLPIYLKFEDVEFKVKNSQAASDNPVKTMMSKVATQLMEEDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDTVKGKITYNGVRYNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMTKQQKYARVETTIKELGLERCRHTKIDGGFLKSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARDSMEYFSSLQFIPEIPMNPAEFLLDLATGQVNDISVPQDILKDQEFADPSKALIKYLKLKYKDILEPKEKEENHGAANTPKHLQLAIQVKKECTLSWLEQFIILYKRTFRSRCKDYFDKLRLVQALGIALVLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYACSTLSDMVAHVFYPTFFMVILYFMAGFKRTVACFFLTLFTVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYLSFMYYGFRLLLKVQYSGDQLYECESIEGCKTLQSSPSFDTVNLKGGLQEVWVLMAMALCFRLLAYFCLRRKIDACS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0144 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 681 - -
Dod08g0144 685 Pfam ABC transporter 109 259 IPR003439 GO:0005524
Dod08g0144 685 CDD ABCG_EPDR 65 313 - -
Dod08g0144 685 Gene3D - 93 326 IPR027417 -
Dod08g0144 685 Pfam ABC-2 type transporter 415 624 IPR013525 GO:0016020|GO:0140359
Dod08g0144 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 4 681 - -
Dod08g0144 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 324 IPR027417 -
Dod08g0144 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 331 IPR003439 GO:0005524
Dod08g0144 685 SMART AAA_5 118 309 IPR003593 -
Dod08g0144 685 Pfam ABC-2 type transporter 288 349 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0144 Dod-Chr8 1597771 1602035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0144 107 292 Calmodulin-binding Proteins AT2G36910 28.986 7.71e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0144 K05681 - gmx:100815259 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0144 08 1597771 1602035 Dod08g0144 08 1597771 1602035 ECH