Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0135 ATGGGAAGCAATCATCTTGTTGGGGAGATTCCTCCAAAACTACACAGATGCCAAAACCTTGAGTTTGTGGACATTCATTCCAATGGTCTCACTGGTTCAGTTCCAAATGTTCTTCCCAAAAGCCTGCAGTTCATTGACTTGTCAGACAACAGGCTAACAGGTGAACTAGATGATTCCATTGGTTCACTAACTGAATTAACCAAACTCAACTTGGGAAAGAATCAGCTCAGCGGAAGAATCCCATCAGAGATCCTATCTTGCTCCAAGCTGCAACTTCTGGACTTGGGAAGCAATAGTTTTTCTGGAGAAATTCCCAAGGAAGTTTGTCAAATTCCTTCACTAGAAATTTCTCTCAACCTTAGTTATAACCAGTTTTATGGTGAAATTCCACACCAGTTCTCTCGTCTTAGCAAGCTAGCAGTGCTTGATCTCTCCCACAACAAGCTCTCAGGCAACTTAGATGCTCTTGCAGGCCTTCAGAACCTTGTTACCTTGAATGTCTCCTTCAATCACTTCTCTGGTGAATTGCCTGACACCCCATTCTTCAGGAGGCTCCCTCTCAGTGACCTCACTGCAAATGATGGTCTCTACATTGCTGGTGGTGCTGGAACTCCAGCTCACAGAATGGGACCACAAGGTCATGCAAGATTAGCTATGAAGATTATAATGTCCATTCTCTTAATCACCAGTGCAGTACTAGCACTGCTCACAATCCATATCTTGGTTCGTGCTCATATTGGCAACAAAAGACTCGAGGGAAGTGACAATTGGGAGATGACTTTGTTTCAGAAGTCTGAATTCTCCATTGATGACATTGTCCGGAATCTGACATCATCCAATGTGATTGGCACTGGAAGCTCTGGTGTTGTGTACAAGGTAGCAATTCCAAGTGGCCAAATACTAGCAGTTAAAAAGATGTGGTCATCATCAGAGTCTGGTGGAGCATTCAGTTCAGAAATTCAGGCACTAAGTTCAGTCAGACACAAGAACATCATCAAGCTTCTTGGATGGGGTTCCAACAAGAGCTTGAAGCTGCTGTTTTATGAATACCTCCCTAATGGGAGCCTGGGCTCATTGCTTCATGGTTCAGGAAAGGAAAAAGCAGAATGGGAGACCAGATATGACATTATATTAGGCTTGGCTCATGCACTTGCATATTTGCACCATGATTGTGTGCCTCCTATATTGCATGGAGATGTCAAAGCCATGAATGTGTTACTAGGCTCTGGCTATCAACCTTACCTTGCTGACTTCGGCCTGGCAAGAACAGTAGGAGAAAATGGTGATGATACTAATTCCAAGCAAGCTCAAAGACCCTACCTTGCTGGTTCCTATGGATACATGGCTCCAGAGCATGCATCAATGCAACCTATCACTGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTCCTACTTGAGGTCCTGACAGGAAGGCACCCATTAGACCCAACTCTACCCGGGGGTGCACACTTGGTTCAGTGGGTCTGGAACCACTTGGCTAGCAAAGGAGACCCATATGACATTCTTGACCCAAAGCTGAGAGGGAGAACTGACCCTACTATGCATGAGATGCTACAAACTTTGGCTGTGTCATTTCTATGTGTCAGCACAAGAGCTGATGAACGCCCTACAATGAAGGACACTGCTGCAATGCTCAAGGGAATTGTGGCCTCAAGGGCAGAAGACCCTGATGTGTTAAAGCGAGGTTTAGCAACACATACTTCCCCGCCACTTCCTAAGAATGTAGTTTCAGATGAATCTTCTAACTGTTCCTTTAGTTTCTCAGATGACTCAATGTGTTGA 1803 0.4476 MGSNHLVGEIPPKLHRCQNLEFVDIHSNGLTGSVPNVLPKSLQFIDLSDNRLTGELDDSIGSLTELTKLNLGKNQLSGRIPSEILSCSKLQLLDLGSNSFSGEIPKEVCQIPSLEISLNLSYNQFYGEIPHQFSRLSKLAVLDLSHNKLSGNLDALAGLQNLVTLNVSFNHFSGELPDTPFFRRLPLSDLTANDGLYIAGGAGTPAHRMGPQGHARLAMKIIMSILLITSAVLALLTIHILVRAHIGNKRLEGSDNWEMTLFQKSEFSIDDIVRNLTSSNVIGTGSSGVVYKVAIPSGQILAVKKMWSSSESGGAFSSEIQALSSVRHKNIIKLLGWGSNKSLKLLFYEYLPNGSLGSLLHGSGKEKAEWETRYDIILGLAHALAYLHHDCVPPILHGDVKAMNVLLGSGYQPYLADFGLARTVGENGDDTNSKQAQRPYLAGSYGYMAPEHASMQPITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAHLVQWVWNHLASKGDPYDILDPKLRGRTDPTMHEMLQTLAVSFLCVSTRADERPTMKDTAAMLKGIVASRAEDPDVLKRGLATHTSPPLPKNVVSDESSNCSFSFSDDSMC* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0135 600 ProSitePatterns Protein kinases ATP-binding region signature. 282 305 IPR017441 GO:0005524
Dod08g0135 600 Gene3D Phosphorylase Kinase; domain 1 243 350 - -
Dod08g0135 600 SUPERFAMILY Protein kinase-like (PK-like) 262 561 IPR011009 -
Dod08g0135 600 SUPERFAMILY L domain-like 2 180 - -
Dod08g0135 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Dod08g0135 600 Gene3D Transferase(Phosphotransferase) domain 1 351 569 - -
Dod08g0135 600 ProSiteProfiles Leucine-rich repeat profile. 138 160 IPR001611 GO:0005515
Dod08g0135 600 SMART serkin_6 276 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0135 600 Pfam Protein kinase domain 279 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0135 600 Pfam Leucine rich repeat 117 172 IPR001611 GO:0005515
Dod08g0135 600 Gene3D Ribonuclease Inhibitor 1 207 IPR032675 -
Dod08g0135 600 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 561 - -
Dod08g0135 600 ProSiteProfiles Protein kinase domain profile. 276 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0135 600 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 561 - -
Dod08g0135 600 PRINTS Leucine-rich repeat signature 42 55 - -
Dod08g0135 600 PRINTS Leucine-rich repeat signature 136 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0135 Dod-Chr8 1543615 1545702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0135 1 599 Receptor kinase-like Gene Family AT5G56040 65.246 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod08g0135 Pkinase 3.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0135 - - gmx:100775762 901.738