Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0130 ATGGGGTCTACCTCTGAGGTTCATTTTTCTGGATTTCACATGGATGGGCTAGAGCAAAGAAAGGCTGGCATGGAGCAACCAACAACTTCAGAAACTGATATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCAGCATCTGGCAAGACTGCTGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTCGTTAATCAGGATTCATTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACTGAACAATTGCTATGCATCATGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATTCCGAAGTATGACTTTAAGGGTTACAAGAGTGGCGTGTCTCCAGCAAGAAGGGTAAATCCTGCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCATGATCCACGTGTTCGAGCACTGATGAATATGAAAATATTTGTTGATACAGATGCTGATGTTCGTCTGGCAAGAAGGATTAGGCGTGATACTGCTGAGAAGGCTCGTGATATTGCAACAGTGCTTGATCAGTATTCTAAGTTTGTGAAGCCGGCTTTTGATGACTTTATCCTTCCAACAAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATCCGCACAAAGCTTGGTCAGCATGACCTGTGTAAAATATATCCTAATTTATATGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCTTGGTACGTGATTCTAAGACAACAAAGCATGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGCCTTGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCTACTGGTTCTGTATATAGTGGTGTGGATTTTTGTAAGAGGTTGTGCGGTGTCTCCATCATCAGGAGTGGGGAGAGTATGGAGAATGCCTTACGAGCATGCTGCAAAGGTATCAAGATTGGGAAGATTCTTATTCATAGGGAAGGTGACAATGGTCAACAGCTAATATATGAAAAATTGCCTAATGATATCTCAGATAGGCATGTGCTACTGTTGGATCCTATCTTAGGCACAGGTAATTCGGCTGTTCAAGCAATTTCCTTACTTTTAAAAAAGGGTGTACCTGAGAACAACATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGCTTTCCAAGAATAAAAATTGTGACATCTGAGATTGAAATTGGTTTGAATGAAGATTTTCGTGTTATCCCTGGCATGGGGGAGTTTGGTGATAGGTACTTTGGAACAGATGATGATGACCAGCAATTGGTGGCCCTTTCTAAGTAG 1410 0.4071 MGSTSEVHFSGFHMDGLEQRKAGMEQPTTSETDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPEAFDTEQLLCIMDKLKRGQAVDIPKYDFKGYKSGVSPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIRRDTAEKARDIATVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLVRDSKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPENNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDQQLVALSK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0130 469 TIGRFAM udk: uridine kinase 36 238 IPR000764 -
Dod08g0130 469 Pfam Uracil phosphoribosyltransferase 256 457 - -
Dod08g0130 469 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Dod08g0130 469 Gene3D - 242 457 IPR029057 -
Dod08g0130 469 PANTHER URIDINE KINASE 9 460 - -
Dod08g0130 469 Gene3D - 34 241 IPR027417 -
Dod08g0130 469 CDD UMPK 40 238 IPR000764 -
Dod08g0130 469 PRINTS Uridine kinase signature 68 79 - -
Dod08g0130 469 PRINTS Uridine kinase signature 170 180 - -
Dod08g0130 469 PRINTS Uridine kinase signature 206 219 - -
Dod08g0130 469 PRINTS Uridine kinase signature 184 195 - -
Dod08g0130 469 PRINTS Uridine kinase signature 38 55 - -
Dod08g0130 469 PRINTS Uridine kinase signature 113 128 - -
Dod08g0130 469 SUPERFAMILY PRTase-like 241 458 IPR029057 -
Dod08g0130 469 PANTHER URIDINE KINASE 9 460 - -
Dod08g0130 469 CDD PRTases_typeI 315 430 IPR000836 -
Dod08g0130 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0130 Dod-Chr8 1503036 1508818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0130 3 460 PRT Gene Family AT4G26510 84.632 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0130 K00876 - gmx:100798205 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0647 05 9676070 9684082 Dod08g0130 08 1503036 1508818 PCT