Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0125 ATGAATGACTCTGCATACAGAGTTGAAACCACATCTCGTCTTGCACAATGGAGAATAGACAACTTGGCTTCTTGCACTTACCGCAAATCTGATCCTTTCAACATAGCCATGTGGAATTGGCATTTATCAGTGGAGAAGAACCGGGTTTCATGTGTTAAGTTACACCCGGAAATATCCAATCTAACAGGGGATGACCCCCCGATTGCATCTTTCATCATTCGGGTGCTTAGTTCTGCTAGAGATCGCAAGCCGTTGGCCCAATCAGAGATAAAAGACAAACTTCTCAGCAACAGAGAAGGCTTTGTGTGGGTAATTGAGGTTCCACTACCCGGGAGATTCATTATTGATGTTGAGTTCCTGGATTTGAAGACTGCATCTCCAAGTGGAGGAGACCATTGTTCCATTTGGCCTAACAGATTTATGCTGCAAAGATCAAATGCAAAAGCCCTCGAGTCTCTTGGTAGAATGCTAACAGAAGGTATCCACACAGACATCACAATCAATGCTTCTGATGGAAGCATTGGGGCTCATCGCGCTGTTCTGGCTGCTCGGTCACCTGTCTTCCGCAGCATGTTATCGCATGATCTTAACGAGAATGATGTGTCTACCATAAACATCTCAGAGATGTCAATTGAAGCTTGCCAGGCATTTCAGAATTATCTTTATGGTATTATCAATCATGAGGAATTTCTGATGCATAGAGTGGCCCTTCTGCATGCGGCAGACAACTATGACATATACGATTTGAGAGAGGCATGTCATGAGAGTCTTGTAGAAGATATTGATGCAACCAATGTGCTTGAGAGGCTGCAAAATGCATCTTTGTACCAATTGCCGAAGCTGAAGACTAGCTGCATGCAATATCTTGTGAAATTTGGTAAAATATTTGACATAAAGGATGATTTCATTGCCTTCTTGCAAAATGCAGATAGGGATCTGATTACTGAAGTCTTCCATGAAGTGCTTCATGGTTGGAAAGGATTCTGA 987 0.4286 MNDSAYRVETTSRLAQWRIDNLASCTYRKSDPFNIAMWNWHLSVEKNRVSCVKLHPEISNLTGDDPPIASFIIRVLSSARDRKPLAQSEIKDKLLSNREGFVWVIEVPLPGRFIIDVEFLDLKTASPSGGDHCSIWPNRFMLQRSNAKALESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMLSHDLNENDVSTINISEMSIEACQAFQNYLYGIINHEEFLMHRVALLHAADNYDIYDLREACHESLVEDIDATNVLERLQNASLYQLPKLKTSCMQYLVKFGKIFDIKDDFIAFLQNADRDLITEVFHEVLHGWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0125 328 SUPERFAMILY POZ domain 147 259 IPR011333 -
Dod08g0125 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Dod08g0125 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Dod08g0125 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Dod08g0125 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Dod08g0125 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Dod08g0125 328 Gene3D Potassium Channel Kv1.1; Chain A 138 291 IPR011333 -
Dod08g0125 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0125 Dod-Chr8 1402822 1405959 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod08g0125 BTB 6.2e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0125 K10523 - gmx:100790186 526.939