Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0124 ATGCCGGGAACCCTAAACCTCACGCTTACAGCCGCCGCCACCGCCGTCGCCTGCGGCCGTTCACCCCGCCACTTCTCCGAATACCGCTCCGTCTCCGCCGCGTTCATGCGGCCGCCGAATGGGAGTTCCGGCGATAAATGCGGACCTTCGATGCGCGCTTTCGCCGCGACGGCGACGGCGGCGCCGTCGAGCCTCTACGAGGTGCTTCGGATCAAGCAGGACGCTTCTGCGACGGAGATCAAGTCCGCGTACCGGAGCCTCGCGAAGGTGTACCACCCTGATTCGGCGGTGCGGCGGCCGGAATCCGACGACAGGGAGTTCATAGAGATCCATGACGCATACGAGACGCTGTCGGATCCGGCGGCGAGAGCAGTATACGACATGTCGTTGCGCTGCGGCGGCGGTGGGAGTCGGCGGCCGCTGGTTAGTCCGAATGGCGGTTACGGGTTCTACCGGAGCCGCAGATGGGAAACGGACCAATGCTGGTAG 489 0.6524 MPGTLNLTLTAAATAVACGRSPRHFSEYRSVSAAFMRPPNGSSGDKCGPSMRAFAATATAAPSSLYEVLRIKQDASATEIKSAYRSLAKVYHPDSAVRRPESDDREFIEIHDAYETLSDPAARAVYDMSLRCGGGGSRRPLVSPNGGYGFYRSRRWETDQCW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0124 162 Pfam DnaJ domain 65 127 IPR001623 -
Dod08g0124 162 SMART dnaj_3 63 122 IPR001623 -
Dod08g0124 162 CDD DnaJ 66 119 IPR001623 -
Dod08g0124 162 ProSiteProfiles dnaJ domain profile. 64 130 IPR001623 -
Dod08g0124 162 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 47 162 - -
Dod08g0124 162 PRINTS DnaJ domain signature 84 99 IPR001623 -
Dod08g0124 162 PRINTS DnaJ domain signature 102 122 IPR001623 -
Dod08g0124 162 PRINTS DnaJ domain signature 66 84 IPR001623 -
Dod08g0124 162 SUPERFAMILY Chaperone J-domain 63 137 IPR036869 -
Dod08g0124 162 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 47 162 - -
Dod08g0124 162 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Dod08g0124 162 Gene3D DnaJ domain 51 136 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0124 Dod-Chr8 1351219 1351824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0124 55 127 C2H2 Transcription Factor Family AT1G74250 40.260 5.67e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0124 - - aprc:113848328 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0628 05 9416760 9417798 Dod08g0124 08 1351219 1351824 PCT