Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0119 ATGGGAATAGGAGCAGCGGGAGATTCAAGTGAGAACAACAGCAACACTCCATTGTTGCTGGATCAAATAAAACCTGATCATGTCAGAAGAACAGGGACGGTATGGACGGCGGTGGCACACATAATAACAGGGGTGATAGGGTCGGGAGTGCTGTCTCTGGCATGGAGTATTGGGCAGCTTGGCTGGGTTGCAGGCCCAATCTCCATTCTTCTCATTGCAGCCGCCACTCTCACCTCTGCTTTCCTTCTCTCCAACGCTTACCGTTCTCCAGATCCCGAATTTGGCCCTCACCGCAGTTCCTCCTACCTTGATGCTGTTGATTCCCATTTAGGACTAAGGGATTCACGACTATCTGCCGTTCTTGTGAATATAAGCTTATATGGTTTTGGAATTGCCTTTGTCATTACATCAGCTATCAGCATAAGAGCAATTCTAGTTTCAAATTGTCACCGCAACAAAGGGCGTGAAGCAGCATGTGAATTTGAAGATGCATACACTATGCTGCTTTTTGGTGTTGTACAAATTGTTCTCTCACAGATACCCAACTTCCATAACATTGAATGGCTTTCAGTCGTCGCTGCAATCATGTCATTTGCTTATGCTTCCATAGCAATGGGGCTTTCCATTGTGCAAATCATAGGAAAAGGACATGCTGAGGGTAGCATTGAAGGGATCCCTGCCTCAAGTGGCACTGAAAAGTTATGGTTGGTAGCCCAAGCACTTGGTGACATATCATTTTCCTATCCCTTCTCAACATTTCTTATGGAAATACAGGATACTTTGAAGTCACCTCCACCTGAAAACCAAACCATGAAGAGGGCCTCTCTAATATCAGTTGCAATCACAACATTCTTCTACCTTGGTTGTGGATGCGCTGGATATGCAGCATTTGGTAATGCTACACCAGGAAACCTTTTAACAGGTTTCGGATCCTCTAAGTATTATTGGCTCGTAGATTTTGCTAACGCTTGCATAGTGGTTCACCTAGTTGGTGCATATCAGGTGCTTAGCCAGCCACTTTTTGCCACTGTTGAGAATTGGTTCCGTTTTAGATTCCCAGACAGTGAATTTGTGAATCACGCATATATCTTGAGACTCCCATTGCTGCCAGCATTTGAAGTCAGTTTTCTGAGGTTGTCTTTCCGAACTGCTTATGTTGTATCAACCATCGTGATTGGGTTGATCTTCCCCTACTTCAATCAGATTTTGGGATTTCTTGGCAGCATAATCTTTTGGCCATTAAGCATATATTTTCCTGTGGAAATGTACTTGGGTTTCTCCGGTATTGAAGCGTGGACGACTAAGTGGGTCATGCTTCGAACTTTCAGCATTTTTGGCTGTCTGTTGGGATTGTTCACTCTTAGTGGATCCATTCAGGGATTAATTACTGCAAAATTAAGCTGA 1404 0.4416 MGIGAAGDSSENNSNTPLLLDQIKPDHVRRTGTVWTAVAHIITGVIGSGVLSLAWSIGQLGWVAGPISILLIAAATLTSAFLLSNAYRSPDPEFGPHRSSSYLDAVDSHLGLRDSRLSAVLVNISLYGFGIAFVITSAISIRAILVSNCHRNKGREAACEFEDAYTMLLFGVVQIVLSQIPNFHNIEWLSVVAAIMSFAYASIAMGLSIVQIIGKGHAEGSIEGIPASSGTEKLWLVAQALGDISFSYPFSTFLMEIQDTLKSPPPENQTMKRASLISVAITTFFYLGCGCAGYAAFGNATPGNLLTGFGSSKYYWLVDFANACIVVHLVGAYQVLSQPLFATVENWFRFRFPDSEFVNHAYILRLPLLPAFEVSFLRLSFRTAYVVSTIVIGLIFPYFNQILGFLGSIIFWPLSIYFPVEMYLGFSGIEAWTTKWVMLRTFSIFGCLLGLFTLSGSIQGLITAKLS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0119 467 Pfam Transmembrane amino acid transporter protein 30 458 IPR013057 -
Dod08g0119 467 PANTHER OS05G0424000 PROTEIN-RELATED 8 466 - -
Dod08g0119 467 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 8 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0119 Dod-Chr8 1299042 1302606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0119 29 449 Organic Solute Cotransporters AT1G77380 50.118 8.12e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0119 K24917 - gmx:100809376 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0119 08 1299042 1302606 Dod08g0119 08 1299042 1302606 ECH
Dod05g0620 05 9303716 9307023 Dod08g0119 08 1299042 1302606 PCT