Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0092 ATGACCTGTTGTCAAAACACAGGTATGGTCCCTGACCGTCCCAAGTACTTGGGTCCTTTCTCTGACCAAATTCCATCATACCTGACTGGTGAGTTCCCTGGTGACTACGGATGGGACACAGCTGGATTATCAGCTGACCCTGAAACCTTTGCCAGGAACCGTGAGCTCGAGGTGATTCACTCCAGATGGGCCATGCTGGGTGCACTGGGATGCACCTTCCCAGAAATCCTTGAGAGGAATGGTGTCAAATTTGGTGAGGCAGTTTGGTTCAAGGCTGGTGCCCAGATCTTCTCTGAGGGTGGCCTTGACTATTTGGGCAACCCCAACCTCATCCATGCTCAGAGCATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTCATGGGATTTGTTGAAGGCTACAGGGTTGGTGGAGGACCACTTGGTGAAGGGCTGGACCCAATTTACCCTGGTGGTGCCTTTGACCCACTTGGTCTTGCTGATGACCCTGAAGCATTTGCAGAGTTGAAGGTGAAGGAACTCAAGAACGGCCGGTTGGCAATGTTCTCCATGTTCGGTTTCTTTGTTCAGGCCATTGTTACTGGCAAGGGGCCTATTCAGAACCTTTATGACCATATTGCTGATCCTGTTGCCAACAATGCTTGGGCTTACGCCACTAACTTTGTCCCTGGACAATGA 675 0.5126 MTCCQNTGMVPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHIADPVANNAWAYATNFVPGQ* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0092 224 Pfam Chlorophyll A-B binding protein 25 190 IPR022796 -
Dod08g0092 224 SUPERFAMILY Chlorophyll a-b binding protein 10 221 - -
Dod08g0092 224 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 224 IPR001344 GO:0009765|GO:0016020
Dod08g0092 224 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 9 224 - -
Dod08g0092 224 Gene3D Chlorophyll a/b binding protein domain 15 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0092 Dod-Chr8 970047 970721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0092 11 224 Chloroplast and Mitochondria Gene Families AT3G27690 92.056 2.43e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0092 K08913 - gmx:100815789 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0092 08 970047 970721 Dod08g0092 08 970047 970721 ECH