Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0084 ATGCAGGCATCCGAGCATCATAGAAGTCCAAGCATGTACTATCAATCTTTGCAACAAATGGAGGCTCACTGCTTGCCGCAGTATCGAAGTCTCAATCATCAGTACTACATTGATGGAGGCCATGGAACAAGATTCTCAAGTTCTTCAGAACTTTACTGCACATTGGAATCATCATCTGCAACTGGCAGTTTCAATGTTTACAACTCTCCCTCAACTGTTAGTTTCTCACCTAATGGTAGCCCAATTTCACATCAAGATTCTCAGTCTCAGTCATATCCACCTGATCAGTATCATTCCCCTGACAATACCTATGGCTCTTCAATGAGTGGTTCCTGCATAACCGATGATTTAAGTTGCTTCAAGCACAAGCTGAGGGAGTTGGAAAGTGTAATGCTTGGCCCTGATTCTGATAATCTTGATAGTTATGACAGTGCCTTCAAGGATGGAACAAGCTTTGTTTCACCTGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTAGCAAGAACCTGAAGCACGTCCTTGTTGCATGTGCCAAAGCAATTGCAGACAATGATTTGCTAATGGCACAATGGCTGATGGACGAATTGCGGCAGATGGTGTCAGTTTCCGGCGAACCAATCCAAAGGTTGGGAGCATACATGTTGGAAGGCCTTGTTGCGCGGTTGTCTGCTTCCGGGAGTTCAATCTACAAAGCCTTGAGATGCAAGGAACCAGCAAGTGCTGATCTCCTTTCCTACATGCACATACTTTATGAGGTTTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCTACGAAAGATGAAGCCAGAGTTCATATAATTGATTTTCAAATTGCTCAAGGGAGCCAGTGGATCACTTTGATTCAGGCCTTTGCGGCTAGGCCTGGAGGACCACCCCACATCCGCATTACAGGCATTGATGATCCAACATCAGCTTATGCCCGCGGGGGTGGGCTGCATATAGTGGGAAAGAGGTTATCTAAGCTTGCTGAGCACTTTAAGGTGCCATTTGAGTTTCATGCTGCAGCTATATCTGGTTGTGATGTTCAGCTGCATAACCTTGGAGTTAGACCAGGTGAGGCCCTAGCTGTGAATTTTGCATTCATGCTACATCACATGCCTGATGAAAGTGTCAGCACACAGAATCATAGGGACAGGTTGTTGAGGCTGGTGAAGAGCCTATCTCCAAAGGTGGTGACACTTGTTGAGCAAGAATCTAACACAAACACTGCTGCATTCTTTCCGCGTTTCCTTGAAACTCTGGACTATTACACGGCCATGTTTGAGTCAATAGATGTGACACTTCCCAGAGAGCATAAAGAGAGGATCAACGTTGAGCAGCATTGCTTGGCCAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAAAGACATGAGGTACTTGGGAAGTGGAGGTCAAGGTTTGCAATGGCTGGTTTCACGCCTTACCCTTTGAGCTCATTGGTGAATGGTACTATTAAGAAATTGCTTGACAACTACAGTGATAGATATAGACTTGAAGAGAGAGATGGAGCCCTTTATCTGGGCTGGATGAATAGAGATTTGGTTGCTTCTTGTGCATGGAAATGA 1629 0.4524 MQASEHHRSPSMYYQSLQQMEAHCLPQYRSLNHQYYIDGGHGTRFSSSSELYCTLESSSATGSFNVYNSPSTVSFSPNGSPISHQDSQSQSYPPDQYHSPDNTYGSSMSGSCITDDLSCFKHKLRELESVMLGPDSDNLDSYDSAFKDGTSFVSPEMDSWRQTMVAISSKNLKHVLVACAKAIADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKALRCKEPASADLLSYMHILYEVCPYFKFGYMSANGAIAEATKDEARVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDPTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLDNYSDRYRLEERDGALYLGWMNRDLVASCAWK* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0084 542 Pfam GRAS domain family 172 542 IPR005202 -
Dod08g0084 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 542 IPR005202 -
Dod08g0084 542 ProSiteProfiles GRAS family profile. 163 542 IPR005202 -
Dod08g0084 542 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 542 - -
Dod08g0084 542 MobiDBLite consensus disorder prediction 75 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0084 Dod-Chr8 902430 905860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0084 110 542 GRAS Transcription Factor Family AT5G48150 77.221 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod08g0084 GRAS 1e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0084 - - gmx:100808300 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0084 08 902430 905860 Dod08g0084 08 902430 905860 ECH