Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0083 ATGGTTTCTTCAGAAGAAACTGCGGATCACAATGTTTCTTCTGATGTATTGGAGGAGAAAGTGAGTCCTCATAGTGATATTACAGAGTCACAAGAGATTCATGATACTAAAATCCCTTTGTCCAAACCAAGAGAAGAAACAAATATTCCTTCTGTTGTGGCTCGAAATGAAGTCAAGGATTCTGATGCTACTGCGTCTTTGCAATCTGATCAAGAAGGAAGCACCAACTCTATAGTACCACTTCAAAAACATTTGCAATCTGGTCATGACAGTCCCTCTATAATTCGTGAAAAGGTATCAAAAGATGGGTATAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGGAACGAATTTATAAGGAGCTATTACAAGTGTACACATCCAAACTGCCTGGCCAAAAAGCAGTTGGAGCAGTCAAATGATGGGCAGATTGCAGATTCCATTAACATTGGTCAGCATAATCATCCTAGACCTCAATTTAACATCACAAAGCCAGTTGATTCTGTTCCTCCAGCTGTTGAAGACAAACCAGACAAGTCCTCTTCAGCCAGTGTGGAAGACAAAGCACCCGTAGAGCATAGACATGTGCCTCAACAGATCAAGCCTTCAGATTCCCCTCAGATTTCAAATGTTTCCCCAACTGATGAGCTGAAAGCTGCACATTTACAATTGACTAGAGCAAATGATGAGGTTCATAACAATGAGGATCCTGACTCAAAGAGGCTCAAGAAAGACAATAGTAATGTTGATGCCACTGGTGCTGACAAGTCAACCTTTGAGTCTCGTGTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTGTGAATGATGGGTACCGCTGGCGCAAATATGGGCAGAAACTGGTTAAAGGGAATACAAATCCAAGAAGTTATTATCGATGCTCTAGTCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGAGCCTCTCATGATTCAAAAATTGTAATAACCACCTATGAGGGACAACATGATCATGAAATACCCCTTGGAAGGACTGTCACGCATAATCCAGCTACAAATGCTAACACTATGACCACTAATGGCAATCCAGGAACCAGATCCGGAGGCAATACTGTTTGTCTAGATGCAAGGGAGCGCAGCTGCTTGGACTTAGAAAGCAGTTCAAATGCGCAACCAAATTGCAAGTCGATTCCTAAATCAGATGCTGGTGATAAGGTTGAATTTCGAGTGACCGGCCTCCAGAGTGAGGGTCCTGAAAGTAAATTAAATGATGATGAACAACAAAATGAAAAAGGGACCGAAGAAGATTCTGTCAGTAATAACATCAAATGCCAAACAAGTTCTGAAGTTCCATGTATATCAGGTGAACAGCTGAAAGATGAGGTAAAAACTAAGTCAGAAGGAAGTAAGGATTGCCTTAATGTGGTTGCCATTCGTGATACTCCTGGCCAAGAAAGTGAACTTAACAAGCAATCAACATCTGATGCAAATGCTGTCCAAAGCTAA 1488 0.414 MVSSEETADHNVSSDVLEEKVSPHSDITESQEIHDTKIPLSKPREETNIPSVVARNEVKDSDATASLQSDQEGSTNSIVPLQKHLQSGHDSPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCLAKKQLEQSNDGQIADSINIGQHNHPRPQFNITKPVDSVPPAVEDKPDKSSSASVEDKAPVEHRHVPQQIKPSDSPQISNVSPTDELKAAHLQLTRANDEVHNNEDPDSKRLKKDNSNVDATGADKSTFESRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNTNPRSYYRCSSPGCPVKKHVERASHDSKIVITTYEGQHDHEIPLGRTVTHNPATNANTMTTNGNPGTRSGGNTVCLDARERSCLDLESSSNAQPNCKSIPKSDAGDKVEFRVTGLQSEGPESKLNDDEQQNEKGTEEDSVSNNIKCQTSSEVPCISGEQLKDEVKTKSEGSKDCLNVVAIRDTPGQESELNKQSTSDANAVQS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0083 495 MobiDBLite consensus disorder prediction 172 200 - -
Dod08g0083 495 ProSiteProfiles WRKY domain profile. 95 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 MobiDBLite consensus disorder prediction 226 255 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 413 431 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 340 363 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 474 495 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 406 440 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 11 42 - -
Dod08g0083 495 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 440 IPR044810 GO:0003700
Dod08g0083 495 Pfam WRKY DNA -binding domain 101 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 Pfam WRKY DNA -binding domain 276 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 MobiDBLite consensus disorder prediction 61 78 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 478 495 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 1 78 - -
Dod08g0083 495 SUPERFAMILY WRKY DNA-binding domain 96 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 MobiDBLite consensus disorder prediction 226 251 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 147 213 - -
Dod08g0083 495 MobiDBLite consensus disorder prediction 339 365 - -
Dod08g0083 495 SUPERFAMILY WRKY DNA-binding domain 267 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 440 - -
Dod08g0083 495 Gene3D WRKY domain 83 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 Gene3D WRKY domain 262 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 MobiDBLite consensus disorder prediction 147 162 - -
Dod08g0083 495 ProSiteProfiles WRKY domain profile. 270 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 SMART WRKY_cls 275 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0083 495 SMART WRKY_cls 100 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0083 Dod-Chr8 899045 901398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0083 212 352 WRKY Transcription Factor Family AT2G04880 36.646 4.49e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g0083 WRKY 2.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0083 K18834 - gmx:100781219 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0083 08 899045 901398 Dod08g0083 08 899045 901398 ECH