Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0080 ATGCCAGCTGCAGAGAACTCAGACGCTGGTTATGATGGAGAAGGGGAACCCTTTGTTGAGGTTGATCCAACAGGGAGATTCGGGCGTTACGATGATCTTCTTGGTTATGGTGCGGTGAAGAAGGTTTATAGGGCCTTTGATCAAGAGGAAGGGATTGAGGTTGCTTGGAATCAGGTTAAGCTGAGGAATTTCAGTGAAGACCCTGTGCTTATAAACAGGCTTCATTCTGAGGTTGAGTTGCTCAGGACGCTTCGCAATAAGTACATCATCGTTTGTTATAGTGTGTGGAAGGATGAGGAGCATCACCACATCAATTTCATCACCGAGGTTTGCACCTCTGGGAATCTGAGGGAGTATAGGAAGAAGCATCGTCATGTTTCAATCAAGGCTTTGAAGAAGTGGTCAAAACAAGTCCTTCAGGGGTTGGAGTATCTTCATACTCATGACCCATGCATTATTCACAGAGATCTCAATTGCAGTAACATATTCGTCAATGGGAATATTGGACAGGTGAAAATTGGTGATCTCGGATTGGCTGCAATAGTTGGAAGGAGCCATGCAGCACATTCAATTTTGGGGACACCGGAGTATATGGCACCCGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGGATGTGTTTGCTTGAGATGGTCACAATGGAGATACCCTACAGTGAATGTGATAGTGTGGCCAAGATATACAAGAAGGTGACCATGGGAATTAGGCCTCAGTCCTTGAACAAAGTCAGAGACCCTGAGGTGAAGGCATTCATTGAGAAGTGCATAGCACAGCCAAGGGCAAGACCTTCAGCCACTGATCTCCTTGAGGATCCTTTCTTTTCTGAACTCAACAATGATGAAGAATCAACTACCTATTAA 897 0.4493 MPAAENSDAGYDGEGEPFVEVDPTGRFGRYDDLLGYGAVKKVYRAFDQEEGIEVAWNQVKLRNFSEDPVLINRLHSEVELLRTLRNKYIIVCYSVWKDEEHHHINFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLQGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIRPQSLNKVRDPEVKAFIEKCIAQPRARPSATDLLEDPFFSELNNDEESTTY* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0080 298 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0080 298 Gene3D Phosphorylase Kinase; domain 1 13 109 - -
Dod08g0080 298 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0080 298 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 290 - -
Dod08g0080 298 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 8 290 - -
Dod08g0080 298 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Dod08g0080 298 SUPERFAMILY Protein kinase-like (PK-like) 21 286 IPR011009 -
Dod08g0080 298 CDD STKc_WNK 26 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0080 Dod-Chr8 886300 888524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0080 3 286 MAP Kinase Kinase Kinase AT5G55560 76.408 4.37e-172 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod08g0080 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0080 K08867 - adu:107496236 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0080 08 886300 888524 Dod08g0080 08 886300 888524 ECH