Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0060 ATGGGGGAGACGCAGAAGCAAGAAGTAGTGTCATGTAGTGAATCATCGGATGAAGAAGCATACCTGTTCGCGATGCAGCTCTCGGGTGCGTCGGCAGTGCCCATGGTTCTGAAATCAGCTTTGGAGCTTGGTATCTTAGAGACGATAGCCAAAGCTGGTCCTGGAGCTCACCTTTCCCCTCAACACATTGCTTCTCAGATCCCAACAATAAAGAACCCCGAAGCACCTGCTTTGCTTGACCGCTTGTTGCGCCTCTTGGCCAGCTTCAACATCCTCACTTGTCAGACTACTACTATGCCTGCTGCTCATGCTCATGCTCATGCTGCTGAAGTCACCACCAGGCACTATGGTCTTGGCCCCTTGGCCAAGTACTTTGTCAACAATGAACATGGGGTCTCCTTGGTTGCTCCTTTCCTCTTGCAACAAGACAAAGTCCTCAAGGACATGTGGTACCACTTGACAGATTCAATTCGGGAGGGTGGACTTCCATTCGACAATTGTTATGGTATGAATTCCTTTGAATTCCATGGCACAGATCCAAGGTCCAACGAGATTTTCAACAAAGCGATGCGTGATCACTCTAGCATCATAATGCAGAAAATTCTCGAGACCTACACAGGCTTTGAGGGTCTTCGATCTGTGGTTGATGTTGGTGGTGGGATCGGAGTTGTTATCAGCATGATTGTCTCTAAGTATCCCACAATCAAGGGCATTAATTTTGACTTACCCCATGTGGTTAAAGAAGCTCCATGCTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTTCCAAAAGGCGATGCCATGTTGATGAAGTGGATATGTCATGACTGGAACGAGGAGCAATGCGTGAAATTTCTGAAGAACTGCTATGATTCGCTTCCGGTGAGCGGGGGGAAGGTGATACTGGTGGAATGCATTGTTCCAGTAGCCCCGGAATCAAGCTCGCGCGCAAGGAGTGTGTTTCAAATGGATGTGATCGTCTTGTGTCATACCTCAGGTGGAAGGGAGAGAACAGAGAAAGAGTATGAGGCCTTGGCTAAGGGTGCTGGGTTTCAAGGCTTCCGAGTTGCATGCTGTGCTCTCAACATGCATGTCATGGAATTTCTTAAGAAGCCTTAG 1131 0.4836 MGETQKQEVVSCSESSDEEAYLFAMQLSGASAVPMVLKSALELGILETIAKAGPGAHLSPQHIASQIPTIKNPEAPALLDRLLRLLASFNILTCQTTTMPAAHAHAHAAEVTTRHYGLGPLAKYFVNNEHGVSLVAPFLLQQDKVLKDMWYHLTDSIREGGLPFDNCYGMNSFEFHGTDPRSNEIFNKAMRDHSSIIMQKILETYTGFEGLRSVVDVGGGIGVVISMIVSKYPTIKGINFDLPHVVKEAPCYPGVEHVGGDMFVSVPKGDAMLMKWICHDWNEEQCVKFLKNCYDSLPVSGGKVILVECIVPVAPESSSRARSVFQMDVIVLCHTSGGRERTEKEYEALAKGAGFQGFRVACCALNMHVMEFLKKP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0060 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 374 IPR016461 GO:0008168
Dod08g0060 376 PANTHER BNAA10G07270D PROTEIN 1 374 - -
Dod08g0060 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 371 IPR029063 -
Dod08g0060 376 SUPERFAMILY "Winged helix" DNA-binding domain 15 129 IPR036390 -
Dod08g0060 376 PANTHER O-METHYLTRANSFERASE 1 374 IPR016461 GO:0008168
Dod08g0060 376 Pfam Dimerisation domain 35 87 IPR012967 GO:0046983
Dod08g0060 376 Pfam O-methyltransferase domain 150 356 IPR001077 GO:0008171
Dod08g0060 376 Gene3D Vaccinia Virus protein VP39 126 374 IPR029063 -
Dod08g0060 376 Gene3D - 2 125 IPR036388 -
Dod08g0060 376 PIRSF O-mtase 1 374 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0060 Dod-Chr8 716064 720210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0060 1 375 Monolignol Biosynthesis Gene Families AT5G54160 58.400 1.96e-164 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0060 K13066 - gmx:100780100 468.388