Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0045 ATGGCGCAAAAGGCACTGCCCTGCGACTCCGATGGTCTCTGCATGCTCTGCAACCAAAAGCCCCCTCTCCACGAGTCCCTCCTCTGCCGCACCTGCGCCACTCCCTGGCACCAGCCCTGCCTCCCCGCCGGCGCCGGCCCCGCCACCATGTCCGACGTTGACAAATGGGAGTGCCCTGACTGCACTGACCTTGCACCCGCAGCACCTCCGCCTGCTGCCGCTGCTGCTTCCGGCACCGCCGGAGGACTAGTGGCGGCGATCCGGGCGATTCAGGAGGACTCTTCGTTGACTGACGAGGAGAAGGCGAAGAAGCGGCAGGAGCTCGTCTGCGGCTCCTCAGAGCCGCCTGCTGCGATGGAGAATGGGAAACCGGCCGCCGATATCTTCGACGGAAAGCTGAACTGCTCATTCTGCATGCAGCTGCCGGAAAGACCGGTCACGACCCCTTGTGGGCATAACTTCTGCCTGAAGTGCTTCGAGAAGTGGGTTAAGCAGGGGAAGAACACATGTGCCAACTGTCGCCGTCAGATCCCGGCGAAGATGGCGAGCAATCCTCGTATCAATGATCAGCTTGCCATGGCCATTCGGTTGGCGAGGCAGGTCCGATCGGGGACGGTGGGACCCGCGGCTCAGCCGAAGGTCTATGTCAGCATGAAAAACGAGAGCCTTCCAGATACAGCCTTCACCACTGAGCGAGCAAAGAAAAGCGGGAAGGCCAATGCTTGCAGTGGGAAGATCTTCGTGACGATTCCTTCGGATTATTTTGGACCAATCACTGCAGAGTATGACCCCAGGAACAATCGTGGGGTTCTGGTTGGGGACACCTGGGAGGACAGGATGGATTGCAGGCAGTGGGGTGCTCATTTCCCTCATGTTGCCGGCATTGCTGGGCAGAAGGGTCATGGTGCTCAGTCTGTTGCACTTTCAGGAGGTTACATTGATGATGAGGACCATGGTGAATGGTTCCTCTACACTGGCAGTGGTGGAAAAGACCTCAGCGGCAACAAACGCACCAACAAACTGCATTCCTTTGACCAGAAGTTTGACAACATGAATGAGGCACTCAGAGTGAGTTGCAAAGAAGGCTACCCTGTTAGGGTTGTGAGGTCACACAAGGAGAAACGGTCTGCTTATGCACCTCAATTTGGAGTGAGGTATGATGGAGTTTATAGAATAGAGAAATGCTGGCGTAAGAAGGGAAAACAAGGTTGCTTGGTTTGCAGATATTTATTTGTTAGATGTGACAATGAGCCCGCCCCATGGACAAGTGATGAATGTGGAGACCGCCCGCGCCCACTACCTGCAGTTAAAGAGTTGAAGGGTGCAATTGATTTAACTGAAAGGAAGAAGGCTCCATCATGGGATTATGATGAGGAAAAGGGCTGCTGGATGTGGAAGAGATCCCCACCAGAAAGCAAGAAATCGGATGGTGCAAAATCTGAAGCTGTGACAGGAAATATAAAAATTGTAAGGAAAAAAGTTAAGAGTTTGCCGGTGAAGGAAAGGCTTATGAAAGAGTTTGGTTGCCAATTGTGTCGCAAGGTGTTAACAATCCCTGTAACCACACCTTGCGGTCATAACTTCTGCAAAGCCTGTCTGGAGGGTGCCTTTTCTGGCCAGAGTTTTATCAGACAAAGGGCAAGTAAAAGTGGACGCACCTTACGTGCACAGAGGAATGTTATGAAATGCCCATCATGTTCATGTGACATAGCCGAATTTCTTCAGAACCCAGAGGTTAACAGAGAAATGACGAGTGCGATAGAGGCACTCATGCGGGAGGCTGAGATGGAGGAGAATTCTCAAGAGTCAAGTGACAACAGTGATGAAAGCCATAAGAATGAGGATGATGTTGATGTTGATGAGACTGAAGTTTTAAAGTCCGGTGATTCTGGTGAAGAGGTCTTGGAGGAGATTAAGGACAATGATCTGAACAAGCGACAGAAGCAGAGGAAGTGTGCTGGTGGTGCTGTTTTTGTCAAAGCTGATGGACTAGTTGATGAGGCAGGACAAGAGGGCAGTGTAAAGGCTTGA 2031 0.5204 MAQKALPCDSDGLCMLCNQKPPLHESLLCRTCATPWHQPCLPAGAGPATMSDVDKWECPDCTDLAPAAPPPAAAAASGTAGGLVAAIRAIQEDSSLTDEEKAKKRQELVCGSSEPPAAMENGKPAADIFDGKLNCSFCMQLPERPVTTPCGHNFCLKCFEKWVKQGKNTCANCRRQIPAKMASNPRINDQLAMAIRLARQVRSGTVGPAAQPKVYVSMKNESLPDTAFTTERAKKSGKANACSGKIFVTIPSDYFGPITAEYDPRNNRGVLVGDTWEDRMDCRQWGAHFPHVAGIAGQKGHGAQSVALSGGYIDDEDHGEWFLYTGSGGKDLSGNKRTNKLHSFDQKFDNMNEALRVSCKEGYPVRVVRSHKEKRSAYAPQFGVRYDGVYRIEKCWRKKGKQGCLVCRYLFVRCDNEPAPWTSDECGDRPRPLPAVKELKGAIDLTERKKAPSWDYDEEKGCWMWKRSPPESKKSDGAKSEAVTGNIKIVRKKVKSLPVKERLMKEFGCQLCRKVLTIPVTTPCGHNFCKACLEGAFSGQSFIRQRASKSGRTLRAQRNVMKCPSCSCDIAEFLQNPEVNREMTSAIEALMREAEMEENSQESSDNSDESHKNEDDVDVDETEVLKSGDSGEEVLEEIKDNDLNKRQKQRKCAGGAVFVKADGLVDEAGQEGSVKA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0045 676 SUPERFAMILY PUA domain-like 239 432 IPR015947 -
Dod08g0045 676 ProSitePatterns Zinc finger PHD-type signature. 14 61 IPR019786 -
Dod08g0045 676 ProSiteProfiles Zinc finger RING-type profile. 135 174 IPR001841 -
Dod08g0045 676 Coils Coil 580 600 - -
Dod08g0045 676 MobiDBLite consensus disorder prediction 594 651 - -
Dod08g0045 676 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 200 IPR013083 -
Dod08g0045 676 ProSitePatterns Zinc finger RING-type signature. 524 533 IPR017907 -
Dod08g0045 676 SMART G9a_1 260 417 IPR003105 -
Dod08g0045 676 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 666 IPR045134 -
Dod08g0045 676 Gene3D - 236 431 IPR036987 -
Dod08g0045 676 SMART PHD_3 13 62 IPR001965 -
Dod08g0045 676 ProSiteProfiles YDG domain profile. 265 413 IPR003105 -
Dod08g0045 676 SUPERFAMILY RING/U-box 501 593 - -
Dod08g0045 676 Pfam SAD/SRA domain 267 416 IPR003105 -
Dod08g0045 676 SUPERFAMILY FYVE/PHD zinc finger 6 64 IPR011011 -
Dod08g0045 676 MobiDBLite consensus disorder prediction 594 649 - -
Dod08g0045 676 SUPERFAMILY RING/U-box 127 182 - -
Dod08g0045 676 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 78 IPR013083 -
Dod08g0045 676 Pfam RING-type zinc-finger 509 563 IPR027370 -
Dod08g0045 676 CDD RING-HC 135 173 - -
Dod08g0045 676 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 497 619 IPR013083 -
Dod08g0045 676 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 666 - -
Dod08g0045 676 ProSiteProfiles Zinc finger RING-type profile. 509 567 IPR001841 -
Dod08g0045 676 MobiDBLite consensus disorder prediction 95 117 - -
Dod08g0045 676 SMART ring_2 135 173 IPR001841 -
Dod08g0045 676 SMART ring_2 14 61 IPR001841 -
Dod08g0045 676 SMART ring_2 509 566 IPR001841 -
Dod08g0045 676 Pfam Zinc finger, C3HC4 type (RING finger) 133 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0045 6 595 C2H2 Transcription Factor Family AT5G39550 60.606 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0045 K10638 - gmx:100786796 927.546