Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0040 ATGAACATGGCGACTATTATTAATCCACAAGATGCCAACCAAGGTGTTTCCTCCGACCCCTTGGGCTGGGTTCTGGCAGCGGATTCACTAAAGGGTAGCCACTTTGATGAGGTGAAACGCATGGTGGCAGAGTACAGGAAGGGAGTGATATGGGTTGGAGGGAAGGAGCCACTAACCATATCGCAGGTGGCTGCTGTTGCAAAGCGTAGCTCACAAGTCAAGGTTGAGCTCTCTGAGTCTGCAAGGGCAGGCGTTGAGGCCAGCTGCGACTGGATCATGGACAGCATTAACAAAGGCAAGGAGGTTTATGGTGTTACCACCGGCTTTGGTGCTGCCTCCCACAGGAAAACCAATCAAGCCTTTGCCCTTCAGAAGGAGATGGTTAGGTTTTTGAACTGCGCAATATTTGGCAGTGAAACTGAGTTATCTAATACCTTGCCTCGGTCAGCAACCAGAGCAGCAATGCTTGTGAGGGTTAATACCCTCCTTCAAGGGTACTCGGGGATCAGATTTGAAATCTTGGAGGCTATCACCAAACTCCTCAACCACAATGTTACACCTATACTGCCACTACGCGGCACAATTACTGCTTCGGGTGATCTGATTCCTCTGTCCTACATTGTCGCACTGCTAACTGGCAGGCGCAACTCCAAAGCTGTTGGACCCTCTGGAGAGTCCCTTAATGCAAAGGAAGCTTTCCATTTAGCGGGTCTTCATTCTGAGTTCTTTGAGCTGAGACCCAAAGAAGGCGTTGCCCTTGTAAATGGCACTGCTGTTGGGTCTGGCGTAGCTTCCGTGGTGCTTTTTGAGGCAAACATATTAGCTTTGTTGTCAGAAGTTCTATCAGCAGTTTTTGCTGAAGTTATGCACGGGAAGCCAGAATTCACACATCATCTGATACATAAGCTGAAGTACCACCCCGGTCAAATTGAAGCTGCTGCTGTTATGGATCACATTTTAGAGGGAAGCTCTTATATCAAAATAGTCAAACTGCAACAGCCAGATCCGTTGCAGAAGCCTAGAAAAGATCGCTATGCTCTCGTAACTTCTCCTCAGTGGCTTGGTCCGCAGATTGAAGTCATCCGGTATTCAACTAAATCAATTGAAAGGGAGATAAACTCTGTAAATGACAATCCTTTGATTGATGTTGCTGGAGATAAGACTTTGAATGGTGGCAATTTCCAAGGCACCCCAATTGGAGTTTCAATGGACAATGCACGTCTAGCTATTGCTTCAATTGGCAAACTCATTTTTGCCCAGTTTACAGAGTTAGTCAATGACTTGTATAATAATGGGTTGCCATCAAATCTCTCTGCTGGCAGAAACCCAAGTCTTGATTATGGTTTTAAGGCATCCGAAGTAGCCATGGCTGCTTACTGTTCTGAACTTCAATATCTAGCAAATCCGGTAACTAGCCACGTTCAAAGTGCCGAGCAGCATAACCAAGATGTGAACTCTTTGGGTTTGATTTCTGCTTGGAAAACTGTCGAAGCTGTTGAGATACTGAAGCTCATGTCTTCCACTTATTTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCACTTGGAGGAAATTTTTAAGGACACGGTTAAGAATACTGTAAGCAGAGTTGCAAAGAAGACATTAAGCACAGAAGACGATGAAGAAATTAACCCGTTCCAATTTTGTGAGAAACATTTGCTCAGAGTGGTTGATAGAGAATATGTGTTCTCCTACATTGATGATCCCTCCAATGTTATGTACCCATTGATGCCGAAACTCAAGCAAGTACTTTATCAGCAAGCACACATGAGTGCCATTAATGACAAGAATGTGAGCTTGTTAACTTTTGAGAAGATTGGAGCTTTTGAGGATGAGTTGAAGTCTCTCTTGCCAAAGGAAGTTGAAAGTGCAAGGGTGGCTTATGAGAATGGCAATCCAGCTATCCCAAACAGAATTAAGGAATGTAGATCATACCCATTATACAAGTTTGTGAGGGACGAGGTAGGGGTAGCGTTGCTGACCGGAGAAAAGACTGTCTCCCCAGATGAGGAATTTGAAAAGGTATTTACAGCAATGTGTCAAGGGAAGATTATTGACCCAATTCTCGAATGCCTCAGAGATTGGAACGGAGCTCCCATCCCAGTATAA 2130 0.4498 MNMATIINPQDANQGVSSDPLGWVLAADSLKGSHFDEVKRMVAEYRKGVIWVGGKEPLTISQVAAVAKRSSQVKVELSESARAGVEASCDWIMDSINKGKEVYGVTTGFGAASHRKTNQAFALQKEMVRFLNCAIFGSETELSNTLPRSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIVALLTGRRNSKAVGPSGESLNAKEAFHLAGLHSEFFELRPKEGVALVNGTAVGSGVASVVLFEANILALLSEVLSAVFAEVMHGKPEFTHHLIHKLKYHPGQIEAAAVMDHILEGSSYIKIVKLQQPDPLQKPRKDRYALVTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVAGDKTLNGGNFQGTPIGVSMDNARLAIASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISAWKTVEAVEILKLMSSTYLVALCQAIDLRHLEEIFKDTVKNTVSRVAKKTLSTEDDEEINPFQFCEKHLLRVVDREYVFSYIDDPSNVMYPLMPKLKQVLYQQAHMSAINDKNVSLLTFEKIGAFEDELKSLLPKEVESARVAYENGNPAIPNRIKECRSYPLYKFVRDEVGVALLTGEKTVSPDEEFEKVFTAMCQGKIIDPILECLRDWNGAPIPV* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0040 709 SUPERFAMILY L-aspartase-like 19 708 IPR008948 GO:0003824
Dod08g0040 709 CDD PAL-HAL 56 520 IPR001106 -
Dod08g0040 709 Gene3D Fumarase/aspartase (Central domain) 258 705 - -
Dod08g0040 709 PANTHER HISTIDINE AMMONIA-LYASE 3 709 IPR001106 -
Dod08g0040 709 Gene3D - 11 257 IPR024083 -
Dod08g0040 709 Gene3D - 523 644 IPR023144 -
Dod08g0040 709 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 19 699 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dod08g0040 709 Pfam Aromatic amino acid lyase 58 523 IPR001106 -
Dod08g0040 709 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
Dod08g0040 709 PANTHER PHENYLALANINE AMMONIA-LYASE 3 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0040 Dod-Chr8 575206 577974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0040 17 709 Monolignol Biosynthesis Gene Families AT2G37040 72.334 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0040 K10775 - gmx:100787872 1197.96