Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0025 ATGGGTTGTTGCCCCTCATCGTTGCTGCTGAGAGTGAGAGAAGGAGAGACTCACCTGGACAAGGACAACCACAAGGACCACCAACCCTACAACAACCACAACCACAACCACAACCACAACCGCTCCCCATCTCATCAGGCTGCTGCTGCTGCCGGTGATCATCGGTGGGTGTCGTTCTCCGAGTTCTCGCTGGCCGAGCTGAGGACGGCGACGGAGAATTTCAGCTCGGAGCAGATAGTGTCGGAGAGCGGGGAGAAGGCGCCCAACGTGGTGTACAAGGGGCGCCTCCACGACCACTGGATTGCCGTCAAGAAGTTCAGCAAGGCCGCCTGGCCCGATCCCAAGCAGTTCGTCGAGGAGGCCTCCGGCGTCGGCAGGCTCCGCCACCCTAGGCTCGCCAATTTGATCGGCTACTGCTGCGACGGCGACGAGCGCCTCCTCGTCGCCGACTACATGCCCAACGACACCCTCGCCAAGCACCTCTTCCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTGAGGGTCGCCCTTTATATCGCCGAAGCTCTCAATTATTGCAGCTCTGAGGGCCGCCCCTTGTACCATGATTTGAATGCTTATCGTCTTCTTTTCGATGAGGACCTGCTGAGCGGGAAGCACATTCCTCCAAGTCAAGCACTTGATATGATACAGGGAAAAAACAACATGCTCTTGATGGATTCACATTTGGAGGGGAAGTTCTCTACAGAAGAGGCAACTGTAGTTGTTAATCTTGCCTCTAAGTGTTTGCAATATGAACCCGGGAAACGGCCTGATACAAAGGATTTGGTCACAACACTTGCACCGTTGAATACAAAACCTGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCACGAGGAAGCTCCATCAGCCCCACAACGGCCTCTTTCTGCAATGGGTGAGGCTTGTTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACTCACTACAGAGATGATGAAGGAACTAATGAGTTGTCATTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTTAGCATTTCGTGACAAGGATTTTAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTTGGAACGATGGTCTCGCCAACTGTTTTTGCACGGCGCAGTCTATGCTATCTGTTATGTGATCAAGCAGACCCTGCGCTCCGAGATGCAATGCAAGCACAATGCGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAATCAGTGGCTCTTGCAAAGTTGGACATGCAAAAGGATGCGACAGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGGGAGAGGTTGA 1380 0.5188 MGCCPSSLLLRVREGETHLDKDNHKDHQPYNNHNHNHNHNRSPSHQAAAAAGDHRWVSFSEFSLAELRTATENFSSEQIVSESGEKAPNVVYKGRLHDHWIAVKKFSKAAWPDPKQFVEEASGVGRLRHPRLANLIGYCCDGDERLLVADYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALNYCSSEGRPLYHDLNAYRLLFDEDLLSGKHIPPSQALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPGKRPDTKDLVTTLAPLNTKPDVRSHIMLGIPKHEEAPSAPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQADPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDATDMLNEAAALEEKRQRGGRG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0025 459 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 209 458 IPR045845 GO:0004672|GO:0009742
Dod08g0025 459 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 209 - -
Dod08g0025 459 Pfam Protein tyrosine and serine/threonine kinase 91 207 IPR001245 GO:0004672|GO:0006468
Dod08g0025 459 SUPERFAMILY Protein kinase-like (PK-like) 57 280 IPR011009 -
Dod08g0025 459 Gene3D Tetratricopeptide repeat domain 349 456 IPR011990 GO:0005515
Dod08g0025 459 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 209 458 - -
Dod08g0025 459 Gene3D Phosphorylase Kinase; domain 1 49 151 - -
Dod08g0025 459 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 209 IPR045845 GO:0004672|GO:0009742
Dod08g0025 459 ProSiteProfiles Protein kinase domain profile. 77 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0025 459 SUPERFAMILY TPR-like 352 453 IPR011990 GO:0005515
Dod08g0025 459 Coils Coil 432 452 - -
Dod08g0025 459 Gene3D Transferase(Phosphotransferase) domain 1 211 292 - -
Dod08g0025 459 Gene3D Transferase(Phosphotransferase) domain 1 153 210 - -
Dod08g0025 459 MobiDBLite consensus disorder prediction 20 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0025 Dod-Chr8 488928 493137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0025 13 210 Glycoside Hydrolase AT3G07070 34.615 1.20e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod08g0025 PK_Tyr_Ser-Thr 6.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0025 K14500 - gmx:100781583 764.992