Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0014 ATGGGAAATTGCTGGGGTTCTCCACCTCCGCCGCCTCAAAACCCCACCCCAACCACAACCGGTAGCCTTAGCACAGGAACAGCGGGGACATCCCAAGCCACCAGCAGCAGCTATACGACTTCATCTGGGAGTGGTGGGAGCAGCTCCATAAATAGCAAGTTCTCCGTGTCCAGCGGTGATGAACCAGCTTATCCTAACGGCCAGATCTTACCTGACGCAAATTTGAGGATCTTCACTTTCGCAGAATTGAAGGCTGCAACTAAGAATTTCAGGCCTGATACAGTGCTTGGAGAGGGCGGTTTCGGGAAAGTCTACAAAGGCTGGCTTGAAGACAAGGCTTCGTCAAAGAATGGAAGTGGTACAGTCATCGCCGTCAAAAAATTGAACTCCGAAAGCTTACAAGGACTCGAGGAGTGGAAGTCAGAAGTAAATTTTCTAGGACGCCTTTCTCATCCTAACCTTGTTAAGCTGTTGGGATACTGTTTGGAGGAAACAGAGCTTCTTCTCATCTATGAATTTATGCAGAAGGGCAGTTTGGAAAATCATCTATTTGGAAGGGGTTCTGCTGTTCAACCACTTCCTTGGGACATCAGGCTTAAGATTGCAATTGGAGCAGCTCATGGAATGGCATTCTTGCATACATCCGAGAAAGTAATCTACAGGGATTTCAAGGCCTCCAATATATTGCTTGATGGAGCCTATAATGCAAAGATATCGGACTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCAATCCCATGTTACAACTAGAGTGATGGGCACATATGGTTATGCTGCTCCTGAATATGTGGCTACAGGGCATCTGTATGTGAAGAGTGATGTGTATGCGTTTGGAGTTGTTTTGGTTGAGATGCTAACAGGCCTGCGGGCACTTGATCCGAACCGTCCAACTGGGCAACATAATCTAACGGATTGGATCAAACCATACCTACATGACAGAAGAAAATTGAAGAGCATTATGGATTCTCGACTGGAAGGAAAATATCCATCCAAGGCTGCTTTTCGTATAGCTCAGCTTGCTTTAAAGTGTCTTGCAGCCGAGCCCAAACAGCGGCCATCAATGAAGGAAGTCTTGGAGAACTTGGAGCGCATTCAAGCTGCCAATGAGAAACCTGTGGAGCCCAGAACTGGCTCTTCTCACAGTACCCGTCGTCAAGGTCACCATGCTGTGCATCATCGTTCTCCTCTTAACGGCTGA 1221 0.4742 MGNCWGSPPPPPQNPTPTTTGSLSTGTAGTSQATSSSYTTSSGSGGSSSINSKFSVSSGDEPAYPNGQILPDANLRIFTFAELKAATKNFRPDTVLGEGGFGKVYKGWLEDKASSKNGSGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEETELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAAHGMAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDPNRPTGQHNLTDWIKPYLHDRRKLKSIMDSRLEGKYPSKAAFRIAQLALKCLAAEPKQRPSMKEVLENLERIQAANEKPVEPRTGSSHSTRRQGHHAVHHRSPLNG* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0014 406 Gene3D Phosphorylase Kinase; domain 1 74 173 - -
Dod08g0014 406 MobiDBLite consensus disorder prediction 18 61 - -
Dod08g0014 406 MobiDBLite consensus disorder prediction 1 17 - -
Dod08g0014 406 CDD STKc_IRAK 96 372 - -
Dod08g0014 406 ProSiteProfiles Protein kinase domain profile. 90 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0014 406 Pfam Protein tyrosine and serine/threonine kinase 94 369 IPR001245 GO:0004672|GO:0006468
Dod08g0014 406 ProSitePatterns Protein kinases ATP-binding region signature. 96 127 IPR017441 GO:0005524
Dod08g0014 406 PANTHER OS01G0588500 PROTEIN-RELATED 11 401 - -
Dod08g0014 406 MobiDBLite consensus disorder prediction 372 406 - -
Dod08g0014 406 PANTHER BNAA09G08980D PROTEIN 11 401 - -
Dod08g0014 406 Gene3D Transferase(Phosphotransferase) domain 1 174 393 - -
Dod08g0014 406 SUPERFAMILY Protein kinase-like (PK-like) 69 369 IPR011009 -
Dod08g0014 406 MobiDBLite consensus disorder prediction 1 61 - -
Dod08g0014 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0014 Dod-Chr8 329255 333136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0014 73 393 Receptor kinase-like Gene Family AT4G02010 48.930 3.37e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod08g0014 PK_Tyr_Ser-Thr 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0014 - - gmx:100305417 652.514