Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0007 ATGGGCAACACATGCCGCGGATCTTTGAAAGGAAAATATATTCAGGGCTTCAGCCAGCCCGAAGACCATTCCAAACGCAACACTCCATCTGATAGCTCCAACTCAGAACACCACCTTACCAAACAAAATCCGAATTCAGCAGAGAGCATTACCAGCGACAACAACAACAACAACAACAACAACATCAACAACAACAACAGCAACACCAGCAATCCACCCTTCAAGAAGGACACCATCATGCGCAGAGGCCTCGACAACCAAGCATATTATGTCCTGGGTCACAAGACTCCCAACATTCGTGATCTATACACTCTTGGCCGTAAGCTGGGCCAGGGGCAATTTGGCACCACTTATTTATGCACCGAGAATGCCACCAACATTGAATATGCATGCAAATCCATCTCCAAGAGGAAGTTGATTTCCAAGGAGGACGTGGAGGATGTTAGGAGGGAAATTCAGATAATGCACCATTTAGCTGGTCACAAGAACATCGTCACTATCAAAGGTGCTTATGAAGATCCCCTCTATGTTCATATTGTCATGGAGCTCTGTTCTGGGGGCGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTACACCGAGAGGAAGGCTGCAGAATTGACCAAAATTATTGTTGGAGTTGTTGAGGCATGTCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTTTTGTTGGTCAATAAGGACGATGATTTCTCTCTCAAAGCAATTGACTTTGGCCTGTCTGTTTTCTTCAAACCAGGTCAAGTTTTCACTGATGTGGTGGGCAGCCCGTACTATGTTGCTCCCGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCGGGTGTCATACTGTACATATTACTTAGTGGAGTGCCACCATTTTGGGCAGAAACCCAGCAGGGAATATTTGATGCTGTTTTGAAGGGACATATAGATTTTGATTCGGATCCATGGCCTCTAATATCTGATAGTGGAAAAGATCTAATAAGAAAGATGCTCTGTTCTCGGCCTTCAGAACGGTTAACAGCTCATGAAGTGTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCTGACAGATCACTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTCTCTGCAATGAACAAGCTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCCGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGACACTGATAACAGTGGTGCAATCACTTTTGATGAACTCAAGGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATACAGAGATACGTGATCTTATGGAAGCGGCTGATGTGGACAACAGTGGAACCATAGATTATGGGGAGTTTATTGCTGCAACAATTCATCTCAACAAACTAGAGCGTGAGGAACATCTCATTGCAGCATTCCAATATTTTGACAAGGATGGGAGTGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATCGATTATGGTGAATTTGCTGCCATGATGCAAGGCAATGCTGGAATTGGAAGGAGGACTATGCGGAACAGTCTGAATTTGAGCATGAGAGATGCACCAAGTGCTCATTAG 1698 0.4417 MGNTCRGSLKGKYIQGFSQPEDHSKRNTPSDSSNSEHHLTKQNPNSAESITSDNNNNNNNNINNNNSNTSNPPFKKDTIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENATNIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQGNAGIGRRTMRNSLNLSMRDAPSAH* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0007 565 SUPERFAMILY Protein kinase-like (PK-like) 86 385 IPR011009 -
Dod08g0007 565 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 548 - -
Dod08g0007 565 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Dod08g0007 565 ProSiteProfiles EF-hand calcium-binding domain profile. 515 545 IPR002048 GO:0005509
Dod08g0007 565 CDD STKc_CAMK 103 360 - -
Dod08g0007 565 SUPERFAMILY EF-hand 385 542 IPR011992 -
Dod08g0007 565 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Dod08g0007 565 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Dod08g0007 565 MobiDBLite consensus disorder prediction 1 78 - -
Dod08g0007 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Dod08g0007 565 ProSitePatterns EF-hand calcium-binding domain. 523 535 IPR018247 -
Dod08g0007 565 Gene3D - 371 542 - -
Dod08g0007 565 SMART efh_1 408 436 IPR002048 GO:0005509
Dod08g0007 565 SMART efh_1 514 542 IPR002048 GO:0005509
Dod08g0007 565 SMART efh_1 444 472 IPR002048 GO:0005509
Dod08g0007 565 SMART efh_1 480 508 IPR002048 GO:0005509
Dod08g0007 565 SMART serkin_6 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0007 565 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Dod08g0007 565 MobiDBLite consensus disorder prediction 33 75 - -
Dod08g0007 565 Gene3D Transferase(Phosphotransferase) domain 1 189 370 - -
Dod08g0007 565 ProSiteProfiles Protein kinase domain profile. 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0007 565 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Dod08g0007 565 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Dod08g0007 565 Pfam Protein kinase domain 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0007 565 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Dod08g0007 565 Pfam EF-hand domain pair 479 540 IPR002048 GO:0005509
Dod08g0007 565 Pfam EF-hand domain pair 409 469 IPR002048 GO:0005509
Dod08g0007 565 Gene3D Phosphorylase Kinase; domain 1 105 188 - -
Dod08g0007 565 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 27 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0007 Dod-Chr8 165260 173263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0007 1 561 EF-hand Containing Proteins AT4G35310 83.304 0.0 958
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod08g0007 Pkinase 1.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0007 K13412 - gmx:100778173 1023.85