Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2250 ATGGGAGGGGAAGGGGAGGGAAAGCTGAAGAGGAAGGAGACTCAGAACTACAACAACAAGAACAAGAAGAAGAAGGGAGGAGGAGGGGGTTTTGAGTGTCTGGGTCTGAGTCCGAATTTGTTCAAGGGAATCAAGCGCAAGGGCTACAAAGTGCCCACTCCCATTCAAAGGAAGACCATGCCCCTCATCCTTTCCGGGGCCGACGTCGTCGCCATGGCCCGCACTGGCTCTGGCAAGACCGCTGCCTTTCTTGTCCCCATGCTTCACCGCCTCAACCAGCACCTTCCTCAGGGTGGCGTCAGAGCCCTCATCTTGTCTCCCACTAGGGACTTGGCTCTTCAGACTCTCAAGTTCACCAAAGAGCTTGGCCACTTCACAGACCTGCGAGTTAGTTTGCTAGTCGGAGGAGATAGTATGGAAAGCCAGTTTGAGGAGTTAGCTCAGAGTCCTGACATTATAATTGCCACCCCTGGTAGGCTTATGCACCACTTGTCGGAGGTCGATGACATGTCATTGCGTACCGTTGAGTATGTTGTTTTTGATGAGGCTGATTGTTTGTTTGGCATGGGTTTTGCTGAGCAGCTGCATCAAATTCTTGCTCAGCTGGGTGAGAATCGTCAGACATTGCTCTACAGTGCTACTTTACCCAGCGCACTTGCTGAATTTGCTAAGGCTGGTTTGCGAGACCCTCAGCTGGTCCGGCTGGATTTGGAAACTAAAATTAGCCCTGACTTAAAGCTTGTCTTTTTCACTTTAAGGCAGGAAGAGAAGTATGCAGCATTGCTCTACTTGATCAGGGAGCAAATTGGTTCTGATCAGCAGACATTAATTTTTGTATCCACAAAGCACCATGTGGAGTTTCTCAATATACTGTTTAGGGAAGAGGGTATCGAGGCCATCTGTATGTTATGGTGA 915 0.4951 MGGEGEGKLKRKETQNYNNKNKKKKGGGGGFECLGLSPNLFKGIKRKGYKVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVPMLHRLNQHLPQGGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLLYSATLPSALAEFAKAGLRDPQLVRLDLETKISPDLKLVFFTLRQEEKYAALLYLIREQIGSDQQTLIFVSTKHHVEFLNILFREEGIEAICMLW* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2250 304 SMART ultradead3 48 248 IPR014001 -
Dod07g2250 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 301 IPR027417 -
Dod07g2250 304 MobiDBLite consensus disorder prediction 1 20 - -
Dod07g2250 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 234 IPR027417 -
Dod07g2250 304 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 60 233 IPR014001 -
Dod07g2250 304 Pfam DEAD/DEAH box helicase 53 220 IPR011545 GO:0003676|GO:0005524
Dod07g2250 304 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 13 299 - -
Dod07g2250 304 Gene3D - 4 234 IPR027417 -
Dod07g2250 304 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 13 299 - -
Dod07g2250 304 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 29 57 IPR014014 GO:0003724
Dod07g2250 304 CDD DEADc_DDX54 31 234 - -
Dod07g2250 304 Gene3D - 235 302 IPR027417 -
Dod07g2250 304 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2250 Dod-Chr7 54334745 54335848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2250 31 289 Eukaryotic Initiation Factors Gene Family AT3G13920 30.651 1.59e-32 122