LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod07g2241	ATGCGAGCTCTAGGAATACATGGACATGTATTGGCTGTTTGGTCCTGTTTTATCATCCTCACAACAGCCACACAACAAACAGATCCTTCAGAAGTAAATGCTTTGGTAGATATCAAGAAAACTTTGAATGATCCTATGGGCCATCTGAGGAACTGGAAAAAGGGTGACCCATGCATACAAAATTGGACTGGGGTTTGGTGTTTCGACAAGGTCGGGAATGATGGATACTATCATGTCCGTGAGCTTTACTTAATGAATATGAATCTGTCGGGAAGTATAGCACCTCAGTTTGGTCAGTTATCGCATCTTCTGACAATGAATCTCATGTGGAATAATCTGACAGGCAACATACCAAAGGAGATTGGAAATATTACATCACTAAAACTCTTGCTCCTAAATGGCAATAATTTATCAGGTAATTTGCCAGATGAGCTGGGAAACCTTGTGAACTTGAGCAGACTCCAAGTTGACCAAAACCAACTCTCAGGTCCTATACCACAATCATTTGCCAACTTAATCAATGTTAGACACCTTCACATGAACAATAACTCATTTAATGGTCAAATTCCACACAAACTATCAAAGCTGTCCAAGCTTCTGCACTTGCTTGTGGACAACAATAACTTGTCGGGCTATCTTCCACCAGAATTCTCCATGTTGCAGGGATTGCGCATACTTCAGCTTGACAACAATAATTTCAGCGGAATAGGCATTCCTTCCACCTATGCAAAGTTATCCAGGCTAGTAAAACTTAGTCTAAGAAACTGCAGCTTGGGAGGCGCTGTTCCTGATTTCAGTTCAATACCCAATCTTAGCTATTTAGATCTAAGCTGGAATCATCTTAGTGGACCTGTACCAACAAATAAACTTGCCGATAATATGACGACTATTGATATGTCAAATAATAATCTCAATGGATCTATCCCACGAAACTTCTCGTATCTTCCTCTTCTTCAAAAATTGTCTCTAGAGAACAATTTCTTGTCTGGGTCCATCCCTACTAGCATATGGCAGAACATGTCCTTCACTATGAATGCTGAACTTGCAGTTGATCTCCGTAACAACTCACTTTCATATTTTTCGGGAATTCCGAACCCCCCAGTAAATGTCACCTTGAGGTATTCAAATTCTATTTGTTTATTGGGTCAGAGAGGAGTAAAACTAATGCAGGCACCAATATCTGCATTAGTCACTCTTGTGATTACTAGAAGACGTATCAAATATAAACATAAGGTTTCTGGGAAACATATATCCTCTAATGTATCTATCAGAATTGATGGAATGAAAGCATTTACTTTTAAAGAGTTGGCCCTTGCTACGGACAAATTTAGTAGCTCAACTAGAGTTGGACAAGGTGGTTATGGGAAAGTTTATAAAGGCATTTTATCTGATGATACAACTGTGGCAATAAAGCGAGCAGAAGAAGATTCCTTACAAGGCCAAAAGGAATTTTTGACTGAGATTGAACTTTTATCAAGGTTACATCATCGGAATCTTGTCTCACTGATTGGTTTCTGTAATGAAAAGGGGGAGCAGATGCTGGTTTATGAATTCATGCCTAATGGCACCCTACGAGACTGGATTTCTGGTATAAGTAAAAGCAAGGAAAGCCTGGATTTTGGTACGAGACTGAAAATTGCAATGGGTTCGGCCAGAGGCATATTATATCTGCATACTGAGGCTAACCCTCCCATATTTCACCGAGATATTAAAGCCAGTAACATACTTCTTGACTCCAAGTTTACTGCAAAAGTGGCTGACTTTGGACTCTCCCGGCTTGCACCCTGCCTAGAAGATGAAGGAACTGTGCCTAATCACGTGTCAACAGTTGTGAGGGGAACACCAGGCTACCTTGACCCAGAGTACTTGTTGACTCATAAGTTGACAGACAAATCTGATGTTTATAGCCTGGGAGTTGTATTTCTGGAGCTTTTGACGGGCGTGAAACCAATATCACACGGGAAAAACATTGTTCGCGAGGTTCGTGTGGCTCATCAGTCAGGCGTGATACATTCCATCATAGACGGCAGAATGGGTTGCTATCCATCTGACTGTGTGGACAAGTTTCTAAGTCTGGCCCTCAGTTGCTGCCATGACAATCCAGATGAGCGACCATCAATGCTAGAAGCGGTGAGGGAGCTGGAGAATATTCTTGGGATTTTGCAAGACGACTGA	2175	0.4133	MRALGIHGHVLAVWSCFIILTTATQQTDPSEVNALVDIKKTLNDPMGHLRNWKKGDPCIQNWTGVWCFDKVGNDGYYHVRELYLMNMNLSGSIAPQFGQLSHLLTMNLMWNNLTGNIPKEIGNITSLKLLLLNGNNLSGNLPDELGNLVNLSRLQVDQNQLSGPIPQSFANLINVRHLHMNNNSFNGQIPHKLSKLSKLLHLLVDNNNLSGYLPPEFSMLQGLRILQLDNNNFSGIGIPSTYAKLSRLVKLSLRNCSLGGAVPDFSSIPNLSYLDLSWNHLSGPVPTNKLADNMTTIDMSNNNLNGSIPRNFSYLPLLQKLSLENNFLSGSIPTSIWQNMSFTMNAELAVDLRNNSLSYFSGIPNPPVNVTLRYSNSICLLGQRGVKLMQAPISALVTLVITRRRIKYKHKVSGKHISSNVSIRIDGMKAFTFKELALATDKFSSSTRVGQGGYGKVYKGILSDDTTVAIKRAEEDSLQGQKEFLTEIELLSRLHHRNLVSLIGFCNEKGEQMLVYEFMPNGTLRDWISGISKSKESLDFGTRLKIAMGSARGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLAPCLEDEGTVPNHVSTVVRGTPGYLDPEYLLTHKLTDKSDVYSLGVVFLELLTGVKPISHGKNIVREVRVAHQSGVIHSIIDGRMGCYPSDCVDKFLSLALSCCHDNPDERPSMLEAVRELENILGILQDD*	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod07g2241	724	CDD	STKc_IRAK	449	717	-	-
	Dod07g2241	724	Gene3D	Ribonuclease Inhibitor	28	190	IPR032675	-
	Dod07g2241	724	Gene3D	Ribonuclease Inhibitor	292	370	IPR032675	-
	Dod07g2241	724	Gene3D	Phosphorylase Kinase; domain 1	414	518	-	-
	Dod07g2241	724	Gene3D	Transferase(Phosphotransferase) domain 1	519	722	-	-
	Dod07g2241	724	Pfam	Leucine rich repeat N-terminal domain	29	67	IPR013210	-
	Dod07g2241	724	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	391	722	-	-
	Dod07g2241	724	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	11	380	-	-
	Dod07g2241	724	Gene3D	Ribonuclease Inhibitor	191	291	IPR032675	-
	Dod07g2241	724	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	565	577	IPR008271	GO:0004672\|GO:0006468
	Dod07g2241	724	SMART	serkin_6	443	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod07g2241	724	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	11	380	-	-
	Dod07g2241	724	SUPERFAMILY	Protein kinase-like (PK-like)	415	714	IPR011009	-
	Dod07g2241	724	SUPERFAMILY	L domain-like	42	377	-	-
	Dod07g2241	724	ProSitePatterns	Protein kinases ATP-binding region signature.	449	471	IPR017441	GO:0005524
	Dod07g2241	724	ProSiteProfiles	Protein kinase domain profile.	443	718	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod07g2241	724	PANTHER	LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN	391	722	-	-
	Dod07g2241	724	Pfam	Protein kinase domain	445	712	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod07g2241	Dod-Chr7	54204816	54212140	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod07g2241	400	718	Receptor kinase-like Gene Family	AT5G01950	68.966	1.50e-145	447

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Dod07g2241		Pkinase	1.7e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod07g2241	-		-	egr:104454082	803.127