Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2231 ATGAAAGAACGCAAATTCCCTTCAAACTTAGAATCCGTCATGTTTGGACGTGTCTTGCAAGGTGTGGACTCATCTAAACGAGATGCATTGATCATCAAGCAAATAATGCGTCAGATTATTACGTCTCTTAAGAAAATTCACAGCACAGGCATTGTTCACAGGGATGTAAAGCCAGCCAACTTAGTGGTTACTAAACGTGGTCAGATTAAACTCATTGATTTTGGTGCCGCAACAGACCTGCGGATTGGGAAGAATTATGTTCCCAACCGTACCCTTTTGGATCCTGACTACTGTCCCCCAGAATTATATGTACTCCCAGAAGAAACTCCAAGTCCTCCACCAGAGCCAATAGCAGCTTTCCTTTCACCAATCTTGTGGCAGTTAAACAGTCCTGATCTTTTTGATATGTATTCGGCTGGGATTGTACTCCTGCAAATGGCAATACCAGCATTAAGGTCTGCTGCTGCTTTGAAGAATTTCAATTTGGAAATAAAAACCTGTGGATATGACTTGAAAAAATGGAGAGACTATACTCGCCTCAGGCCTGACTTCCAGATTCTGGATAGTGAATCTGGTAGAGGGTGGGACTTAGCTACAAAGCTTATCTCAGAGAGAGGTTACCTAAGAAGAGGACGTTTATCTGCTGCCGCTGCTTTGCGACACCCTTATTTTCTTCTGGGCGGTGATCAGGCAGCTGCTGTCCTTTCAAAATTAAGCTTGAGCAGGAAGTGA 732 0.4358 MKERKFPSNLESVMFGRVLQGVDSSKRDALIIKQIMRQIITSLKKIHSTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPALRSAAALKNFNLEIKTCGYDLKKWRDYTRLRPDFQILDSESGRGWDLATKLISERGYLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSRK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2231 243 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 241 IPR044803 GO:0004674|GO:0009579
Dod07g2231 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Dod07g2231 243 Gene3D Transferase(Phosphotransferase) domain 1 20 226 - -
Dod07g2231 243 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2231 243 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 241 - -
Dod07g2231 243 SMART serkin_6 4 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2231 243 Pfam Protein kinase domain 31 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2231 243 SUPERFAMILY Protein kinase-like (PK-like) 27 225 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2231 Dod-Chr7 54077153 54078201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2231 25 148 MAP Kinase Kinase Gene Family AT1G18350 30.534 1.26e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Dod07g2231 Pkinase 8.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2231 - - gmx:100788727 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0930 01 17168326 17171650 Dod07g2231 07 54077153 54078201 PCT