Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2228 ATGGAGAATGTTGTTGTGGATCGTAGAAGTAAGGCAATCGAGGAGCTTGTGAGAGGGCGTGAGTTTGCCAATCAGCTTAGACAAATCATCATCAATAGAGATAGAGATGATGATGATGATGAGTCAGCAGCAGCAGCAGCAACCCAGCATCTTGTAAAGAAGGTGGTGACCTCCTTTGCCAACACCCTCTTCCTCTTCAACAAATATCCCACTTACCAACCCCTTCTTGTTGATCCTGCTTGCTTGGTTATTAGTCCCGCTAAATCTCATGAAGAGGAGCAGGACTCTCAAGACAGTTTCAGTACCAGTCCCACGGCCCTTAAGGAGGAGCACACAAGAGGGTTTTACAAGAGAAAAAGAAGCATAGAAACATGGACGAAGGTGTCGGAAACTCAAACAGATCATGATGACCATCAATGGAGAAAGTATGGCCAGAAGCAGATCCAAAATGCCAAATACTCAAGGAACTACTACAGGTGCACCCACAAGTATGATCAGGGTTGCCAAGCAACCAAACATGTGCAGAAGGTTCAAGAGGAGCCTCCCTTGTATAGGATCACCTATTATGGCCACCACACTTGCAGAAACCTGCTGAACCCAGCAGAGATCACACTTGAGGACGGATATTATTCCACTTCTCATCCTCCCGACTCTTCCATATTGCTTAGCTTTGACAACTCCTTCCCAAACCCAACCATATCACCATCATTTTTCCCCTCAACAACATCATCATCAGTACAGGCCATGGAATATCAGGAGGAGTGTAGTAATAATAATAATAATAAGGATCATCAGGTGGTGGCGCCCTCGTCATCTTCAACGGAGCCCACTTTGGACAATTCGCAGAGGCATGTCACCCTATCATCAACCCTCAAATCAGAAGATTACTGGGATGTGATGATGTCTGGGTTCATCTATGGCTCTTTTGTTGACGATGACTTCCGGCCTTTTGATGGATTTTGA 963 0.4548 MENVVVDRRSKAIEELVRGREFANQLRQIIINRDRDDDDDESAAAAATQHLVKKVVTSFANTLFLFNKYPTYQPLLVDPACLVISPAKSHEEEQDSQDSFSTSPTALKEEHTRGFYKRKRSIETWTKVSETQTDHDDHQWRKYGQKQIQNAKYSRNYYRCTHKYDQGCQATKHVQKVQEEPPLYRITYYGHHTCRNLLNPAEITLEDGYYSTSHPPDSSILLSFDNSFPNPTISPSFFPSTTSSSVQAMEYQEECSNNNNNKDHQVVAPSSSSTEPTLDNSQRHVTLSSTLKSEDYWDVMMSGFIYGSFVDDDFRPFDGF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2228 320 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g2228 320 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g2228 320 MobiDBLite consensus disorder prediction 248 283 - -
Dod07g2228 320 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g2228 320 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 287 - -
Dod07g2228 320 ProSiteProfiles WRKY domain profile. 129 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod07g2228 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 287 IPR044810 GO:0003700
Dod07g2228 320 SUPERFAMILY WRKY DNA-binding domain 128 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod07g2228 320 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2228 Dod-Chr7 54047046 54049401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2228 8 194 WRKY Transcription Factor Family AT3G56400 35.979 1.26e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod07g2228 WRKY 3.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2228 - - lja:Lj3g3v0459900.1 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0938 01 17232418 17234514 Dod07g2228 07 54047046 54049401 PCT