Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2213 ATGGAAAGTGATGCTCATCAAGACAACAAATTGTTTGCCACATCCTCTTGCTCCACTTCCACCACCATTGACACCAACAACACTTCTACCTCATCCTCCTCTTCATCACCAACAACACCTCCACCACCACCATCAACAACAGCATCTTCAACTTCAAACTCAGATAATTCAGACAGGGGCGAGCTTTCTCCTCCGCCTAAACTTTATATCACCAAAAACTCAGATAATTCATGCACCAAACAAGACCCCAAAACACCCCCAAAGGACTCAAAGGAGTGCAAGAAGAGGCATAGAAGCGAGAGTAGTGATAGCAAGCATCCAACTTATAGAGGTGTGAGGATGAGAAACTGGGGCAAATGGGTTTCTGAGATACGTGAGCCAAGGAAGAAGTCAAGGATATGGCTTGGGACATACCCTACTGCAGAAATGGCAGCAAGAGCACATGATGTAGCTGCTTTAGCCATAAAGGGCCATTCAGCATACCTCAATTTCCCTGAATTGGCACAAGAGCTTCCAAGACCAGCAAGCACATCACCAAAGGACATTCAAGCTGCAGCTGCCAAAGCAGCAAACACTGCCTTTGAGGATGTTATAAAGCATTGTCAAGCTGAAGAAGCACAACCAAGCCAACTGGATCAAGCTTCATCTTCTACTACTCAAGAGTCTTCAAGTTCTCCCTCTACCATTGATGATGACACATTGTTTGACCTACCAGATCTTTTCCCTGATGAAAACCATGGACTTTGCTTCTATTCTTCTTCTTGGCATTTGTGTGCAGTTGATAGTGGATTCAGGTTTGAGGAGCCATTATTTTTTTGGGAGAATTACTAG 831 0.444 MESDAHQDNKLFATSSCSTSTTIDTNNTSTSSSSSSPTTPPPPPSTTASSTSNSDNSDRGELSPPPKLYITKNSDNSCTKQDPKTPPKDSKECKKRHRSESSDSKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPASTSPKDIQAAAAKAANTAFEDVIKHCQAEEAQPSQLDQASSSTTQESSSSPSTIDDDTLFDLPDLFPDENHGLCFYSSSWHLCAVDSGFRFEEPLFFWENY* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2213 276 MobiDBLite consensus disorder prediction 205 231 - -
Dod07g2213 276 Pfam AP2 domain 107 158 IPR001471 GO:0003700|GO:0006355
Dod07g2213 276 CDD AP2 109 167 IPR001471 GO:0003700|GO:0006355
Dod07g2213 276 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Dod07g2213 276 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Dod07g2213 276 MobiDBLite consensus disorder prediction 1 110 - -
Dod07g2213 276 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 276 - -
Dod07g2213 276 MobiDBLite consensus disorder prediction 8 35 - -
Dod07g2213 276 MobiDBLite consensus disorder prediction 82 110 - -
Dod07g2213 276 Gene3D AP2/ERF domain 108 166 IPR036955 GO:0003700|GO:0006355
Dod07g2213 276 MobiDBLite consensus disorder prediction 206 231 - -
Dod07g2213 276 PANTHER ETHYLENE RESPONSE FACTOR 20 276 - -
Dod07g2213 276 SMART rav1_2 108 171 IPR001471 GO:0003700|GO:0006355
Dod07g2213 276 SUPERFAMILY DNA-binding domain 108 166 IPR016177 GO:0003677
Dod07g2213 276 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2213 Dod-Chr7 53862041 53863080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2213 95 272 AP2-EREBP Transcription Factor Family AT2G44940 56.250 1.35e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod07g2213 AP2 3.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2213 - - gmx:100801129 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2213 07 53862041 53863080 Dod07g2213 07 53862041 53863080 ECH