Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2212 ATGTTTGGGCGTGGGCCAAGGAAGAGTGATAGCACCAAGTATTACGATGTTCTTGGTGTTTCAAAAAGTGCTAGTGAAGATGAAATCAAGAAGGCCTATAGAAAAGCAGCAATGAAGAACCATCCAGATAAAGGTGGAGATCCTGAGAAGTTCAAGGAGTTAGGTCAAGCTTATGAAGTTTTAAGTGATCCTGAAAAGAGGGAGCTGTATGACAATTATGGTGAAGATGCCCTTAAGGATGGGATGGGAGGAGGAGGAGCCTCATTTCATAATCCATTTGATATTTTTGAATCATTTTTTGGTGGAGGTGCCTTTGGTGGTGGTGGAAGCTCACGAGGTAGAAGACAAAAGCATGGTGAAGATGTTGTGCATTCTCTAAAGGTTTCCTTGGAGGACGTCTATAATGGAACAGCAAAGAAACTTTCTCTTTCTAGAAATATATTATGCCCAAAATGTAGAGGGAAAGGATCCAAAAGTGGAACTTCTGGTAGGTGTTTTGGATGCCAAGGCACAGGCATGAAAGTCACAACAAGACAGATTGGACCAGGCATGCTTCAACAAATGCAACACATCTGTCCTGAATGCAGAGGAGCTGGTGAGGTCATTAGTGAGAGAGATAAATGCACTCAATGCAAGGGAAGCAAGGTCAGCCAGGAAAAGAAGGTGCTGGAGGTCCATGTTGAGAAGGGAATGCAGCAGTCTCAGAAGATTGTGTTTGAAGGGCAAGCTGATGAAGCTCCTGACACAATCACAGGGAACATTGTTTTTGTCCTACAAGTGAAGGAGCATCCACGGTTCAAGAGGGTGCATGATGACCTCTATATTGACCACACTCTCAACTTAACTGAGGCACTTTGTGGCTTCCAGTTTACTGTCACCCATCTTGATGGGAGGCAACTATTGATCAAATCAAATCCTGGGGAAGTCATCAAGCCAGGTCAATCTAAAGCCATAAATGATGAGGGAATGCCCCAACACAATAGGCCCTTCATGAAGGGTCGCCTTTACATCAAGTTTAATGTTGATTTCCCAGAGTCAGGGTCCATTTCCCCTGAGCAATGCCGCATATTAGAGACGATATTACCTCAGAAGGCCAGCAAGCACCTGACAGATATGGAGCTGGATGAGTGTGAGGAGACCACCTTGCATGATGTCAACATGAAGGATGAGAAGAGAAGAAAGCAGCAACAGCATTACCATGAGGCATATGATGAGGATGATGATGATGAGCAATCCATGCCTCGAGTGCAATGTGCTCAGCAGTAG 1266 0.4463 MFGRGPRKSDSTKYYDVLGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRELYDNYGEDALKDGMGGGGASFHNPFDIFESFFGGGAFGGGGSSRGRRQKHGEDVVHSLKVSLEDVYNGTAKKLSLSRNILCPKCRGKGSKSGTSGRCFGCQGTGMKVTTRQIGPGMLQQMQHICPECRGAGEVISERDKCTQCKGSKVSQEKKVLEVHVEKGMQQSQKIVFEGQADEAPDTITGNIVFVLQVKEHPRFKRVHDDLYIDHTLNLTEALCGFQFTVTHLDGRQLLIKSNPGEVIKPGQSKAINDEGMPQHNRPFMKGRLYIKFNVDFPESGSISPEQCRILETILPQKASKHLTDMELDECEETTLHDVNMKDEKRRKQQQHYHEAYDEDDDDEQSMPRVQCAQQ* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2212 421 MobiDBLite consensus disorder prediction 387 421 - -
Dod07g2212 421 CDD DnaJ_C 120 346 - -
Dod07g2212 421 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 346 IPR008971 GO:0006457|GO:0051082
Dod07g2212 421 Pfam DnaJ domain 13 71 IPR001623 -
Dod07g2212 421 CDD DnaJ_zf 149 215 IPR001305 GO:0031072|GO:0051082
Dod07g2212 421 PRINTS DnaJ domain signature 15 33 IPR001623 -
Dod07g2212 421 PRINTS DnaJ domain signature 46 66 IPR001623 -
Dod07g2212 421 PRINTS DnaJ domain signature 66 85 IPR001623 -
Dod07g2212 421 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Dod07g2212 421 CDD DnaJ 14 63 IPR001623 -
Dod07g2212 421 MobiDBLite consensus disorder prediction 387 402 - -
Dod07g2212 421 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 421 IPR044713 GO:0006457|GO:0030544
Dod07g2212 421 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 146 217 IPR036410 -
Dod07g2212 421 Gene3D DnaJ domain 10 110 IPR036869 -
Dod07g2212 421 Gene3D - 264 345 - -
Dod07g2212 421 Gene3D - 149 215 - -
Dod07g2212 421 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Dod07g2212 421 SUPERFAMILY HSP40/DnaJ peptide-binding domain 120 264 IPR008971 GO:0006457|GO:0051082
Dod07g2212 421 Hamap Chaperone protein DnaJ [dnaJ]. 10 390 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dod07g2212 421 SUPERFAMILY Chaperone J-domain 9 109 IPR036869 -
Dod07g2212 421 Pfam DnaJ central domain 149 215 IPR001305 GO:0031072|GO:0051082
Dod07g2212 421 PANTHER CHAPERONE PROTEIN DNAJ A6 8 421 - -
Dod07g2212 421 SMART dnaj_3 12 66 IPR001623 -
Dod07g2212 421 Pfam DnaJ C terminal domain 123 344 IPR002939 -
Dod07g2212 421 ProSiteProfiles Zinc finger CR-type profile. 136 220 IPR001305 GO:0031072|GO:0051082
Dod07g2212 421 Gene3D - 111 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2212 Dod-Chr7 53845560 53850244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2212 14 73 C2H2 Transcription Factor Family AT1G74250 47.826 2.17e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2212 K09503 - gmx:100800590 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2212 07 53845560 53850244 Dod07g2212 07 53845560 53850244 ECH