Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2208 ATGCATGGGAAGAATAAAGAGCAAGAGTATATAAGGAAGGGGCCATGGAAAGCAGAGGAAGATGAGGTGCTACTTAACCACGTCAACAAGTATGGCCCAAGAGAGTGGAGCTCCATTCGATCCATGGGACTTCTTCAAAGGACTGGCAAGTCCTGTCGCCTCCGTTGGGTCAATAAGCTTCGACCAAACCTCAAGAATGGGTGCAAGTTTACACTAGAGGAAGAGAGGGTTGTCATAGACTTGCAAGCACAATTTGGGAACAAATGGGCCAAGATTGCATCTTATTTGACAGGCAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGGCAGAAGAGGCTTGCTAGGATTCTGCAGCAGACATCAACAACTACCTCCAAATCACAAAAGAACAAAGCTAAAGTTCCTACAGTTCATGATGTCCCCTCTTTGGAGGCTCCTAAGCTCAGTTCTTCATCAGAGGGAGAACCATCATCCTCAAAGCCTCAGGCATGCTCATTATCCTGCATTGAAAATTCGGAGGTTATCAAAATGGTGTCCTTGCCAGATCTTATAAGGTCCAAGCCACCTAGTTCTGACACAAACCATTTTGAGCAAGAGTTTATTACCCCTTTTGAGAGCTACAAAAGCACTGAACAGATTGCATTCCCTCTGAATCCAGAACTCCAAACTGATCTTACATTCCCAGTGGGAAGCCAAGATCTCTTGACTAGAATTGATGATCCAAATTTTATAGATGTCTTTGGCCATATGGATACCTATGAGCTTGGGATAGGTCCACAACACCCCACTGAGTTCCCTTTCTTTGAGCCATCAGGAAGCTGCAGAATGGGCACAATGGATATAGTTGGTAGCTCCAAAACCTGTGACAGCTTCTTTGATGATTTCCCAGTGGACATGTTCGATCACATGGAGCCACCATCAAGCCCACCGAACCTATGA 945 0.4508 MHGKNKEQEYIRKGPWKAEEDEVLLNHVNKYGPREWSSIRSMGLLQRTGKSCRLRWVNKLRPNLKNGCKFTLEEERVVIDLQAQFGNKWAKIASYLTGRTDNDVKNFWSSRQKRLARILQQTSTTTSKSQKNKAKVPTVHDVPSLEAPKLSSSSEGEPSSSKPQACSLSCIENSEVIKMVSLPDLIRSKPPSSDTNHFEQEFITPFESYKSTEQIAFPLNPELQTDLTFPVGSQDLLTRIDDPNFIDVFGHMDTYELGIGPQHPTEFPFFEPSGSCRMGTMDIVGSSKTCDSFFDDFPVDMFDHMEPPSSPPNL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2208 314 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Dod07g2208 314 Gene3D - 13 65 - -
Dod07g2208 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 64 IPR017930 -
Dod07g2208 314 MobiDBLite consensus disorder prediction 147 165 - -
Dod07g2208 314 SMART sant 66 114 IPR001005 -
Dod07g2208 314 SMART sant 12 62 IPR001005 -
Dod07g2208 314 Pfam Myb-like DNA-binding domain 13 58 IPR001005 -
Dod07g2208 314 Pfam Myb-like DNA-binding domain 69 108 IPR001005 -
Dod07g2208 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 116 IPR017930 -
Dod07g2208 314 CDD SANT 69 108 IPR001005 -
Dod07g2208 314 CDD SANT 15 60 IPR001005 -
Dod07g2208 314 MobiDBLite consensus disorder prediction 119 133 - -
Dod07g2208 314 MobiDBLite consensus disorder prediction 119 165 - -
Dod07g2208 314 Gene3D - 68 140 - -
Dod07g2208 314 ProSiteProfiles Myb-like domain profile. 69 112 IPR001005 -
Dod07g2208 314 PANTHER TRANSCRIPTION FACTOR DUO1 1 312 - -
Dod07g2208 314 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2208 Dod-Chr7 53753680 53755745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2208 1 311 MYB Transcription Factor Family AT3G60460 47.531 2.60e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod07g2208 Myb_DNA-bind_6 3.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2208 K09422 - gmx:100805384 462.996