Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2195 ATGGGTGAGAAAGATGATGACATGGGTTTGGGGTTGAGCTTGAGCTTGGGGTGTGGAGAGAATGCAAATAATCAACAACAACCCTTGAAGGTGAATCTCATGCAAAAGCCTCCTCAATCGGTTCCAAACCAAAGGGTTTCCTTAAACAACTTGTTTCATTTTCATGATCTGAGCTCCGAGACGAGGTCGTTCCTTCGCGGAATCGACGTGAATTCCGCGCCGCCGTATACGGCCGCTGGGGCCGCGGCATGCGACGAAGAGAACGGCAGCGCATCGTCGCCGAACAGCACTGTGTCGAGCATCAGCGGGAAGCGAAGCGAGAGAGAACCCAACGGAGACGAGAACGACACCGGCGAGAGGACATCGTGCTCTCGCGGCGGAGGCGGAGGAAGCGACGAAGATGACGGCAGTGGTTTCGGCGGCGACGGGGACGGCGATGGCGGAGACAGCTCGAGGAAGAAGCTGAGGCTGTCGAAGGAGCAGTCGGTGGTTCTGGAAGAGACCTTCAAGGAGCACAACACTTTGAACCCGAAACAAAAGCAAGCATTGGCAAAGCAGTTGAATCTGAGGCCTAGGCAGGTGGAGGTGTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTGAAGCAGACTGAAGTGGACTGTGAATACTTGAAGAGATGCTGCGAGAATCTAACGGAAGAGAACAGGAAGTTGCAAAAGGAAGTGCAAGAGCTTAGAGCATTGAAGTTATCCCCACAGCTCTACATGCACATGAACCCTCCCACCACTCTTACAATGTGCCCTTCATGTGAGCGTGTTGCTGTCTCATCAGCATCCTCCTCTTCATCAGCCCCTGTGCCCCCTGCCCCAGCTCCAACTAGTCACATCCCACTGGTCCCTAACATCGAGCGGCCGGTGCCTATCAATCCTTGGGCTGCAATGCCAATCCAACACCGGCCGCTTGAGGGCCCAACTTCCCGACCATAA 966 0.5445 MGEKDDDMGLGLSLSLGCGENANNQQQPLKVNLMQKPPQSVPNQRVSLNNLFHFHDLSSETRSFLRGIDVNSAPPYTAAGAAACDEENGSASSPNSTVSSISGKRSEREPNGDENDTGERTSCSRGGGGGSDEDDGSGFGGDGDGDGGDSSRKKLRLSKEQSVVLEETFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRKLQKEVQELRALKLSPQLYMHMNPPTTLTMCPSCERVAVSSASSSSSAPVPPAPAPTSHIPLVPNIERPVPINPWAAMPIQHRPLEGPTSRP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2195 321 Coils Coil 214 244 - -
Dod07g2195 321 Pfam Homeobox associated leucine zipper 208 242 IPR003106 GO:0006355|GO:0043565
Dod07g2195 321 Gene3D - 156 206 - -
Dod07g2195 321 PANTHER - 7 310 - -
Dod07g2195 321 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Dod07g2195 321 MobiDBLite consensus disorder prediction 1 23 - -
Dod07g2195 321 SMART halz 208 251 IPR003106 GO:0006355|GO:0043565
Dod07g2195 321 SUPERFAMILY Homeodomain-like 139 209 IPR009057 -
Dod07g2195 321 SMART HOX_1 150 212 IPR001356 GO:0003677
Dod07g2195 321 MobiDBLite consensus disorder prediction 88 105 - -
Dod07g2195 321 CDD homeodomain 152 209 IPR001356 GO:0003677
Dod07g2195 321 MobiDBLite consensus disorder prediction 82 157 - -
Dod07g2195 321 MobiDBLite consensus disorder prediction 272 291 - -
Dod07g2195 321 MobiDBLite consensus disorder prediction 106 120 - -
Dod07g2195 321 ProSitePatterns 'Homeobox' domain signature. 183 206 IPR017970 GO:0000981|GO:0006355
Dod07g2195 321 Pfam HD-ZIP protein N terminus 1 109 IPR006712 GO:0005634
Dod07g2195 321 Pfam Homeodomain 152 206 IPR001356 GO:0003677
Dod07g2195 321 ProSiteProfiles 'Homeobox' domain profile. 148 208 IPR001356 GO:0003677
Dod07g2195 321 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 7 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2195 Dod-Chr7 53443039 53447643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2195 38 316 Homeobox Transcription Factor Family AT3G60390 61.592 8.67e-105 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod07g2195 HD-ZIP_N 2.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2195 K09338 - gmx:100810641 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2195 07 53443039 53447643 Dod07g2195 07 53443039 53447643 ECH
Dod07g2195 07 53443039 53447643 Dod01g0005 01 55020 58375 PCT