Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2179 ATGGCAAAGAATTCGCCATTGAATATTGGCAATAAAGATGCCAATCCTCGCCCTAATAGCCTAGAAATAGCGATGATGGCAAAGAAACTATGCGGTGATGCAACGCTGGGGTATTGTGGCAAGTGTGTTGACTTCAAGAAAGCTTGTGAGATGTTCAAGACCCCACCATGCGGGCACTCGATTTGCAACCACTGCATGCATGAGCACGTGGCTTCCAACCTCAGGGAGAACAGCTTGCACGTGCCTTGCCCCTTCAAGGATTGCGATGTCGTGTTCAAGCCTAGGTGCTTTCGGTTCATCCTCCCTCAACAAGTGCTTCGTCGATGGGAGAATGCTCTGTTTGAGCATAGCATGATTTTGGACCAAGTTCAAGAGACCAGGAAACGTGCCAGGGTTGTTGAATAA 405 0.4864 MAKNSPLNIGNKDANPRPNSLEIAMMAKKLCGDATLGYCGKCVDFKKACEMFKTPPCGHSICNHCMHEHVASNLRENSLHVPCPFKDCDVVFKPRCFRFILPQQVLRRWENALFEHSMILDQVQETRKRARVVE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2179 134 ProSitePatterns Zinc finger RING-type signature. 57 66 IPR017907 -
Dod07g2179 134 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 32 120 - -
Dod07g2179 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 119 IPR013083 -
Dod07g2179 134 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 32 120 IPR031127 GO:0004842|GO:0016567
Dod07g2179 134 SUPERFAMILY RING/U-box 37 116 - -
Dod07g2179 134 ProSiteProfiles Zinc finger RING-type profile. 39 84 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2179 23 90 RAD5 or RAD16-like Gene Family AT1G61140 35.294 8.61e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2179 - K11975 zju:107429989 80.8777