Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2174 ATGGCCCACTTCGGCGCCGTCACCACCGACTGGCTCGCTCAGTCCGCCTCCTCCGCTGCAATCAACACCCACAACCCACCACTGCCACCGACCACCACCACCGCCGCCGCCGCCGTCTCCGATGCCTTCTCCGTCATCGACGAGTTCAACCGCTGGCGGAAACAGCCCGACCTGGCGGAGGCCGTCGCCGCCATCCGCGCCCTCGCCGCCTCCTGGGATACAACCTCTATCTCTCTGACAGCAGCCTGTGATCTGTTTATGCGGTATGTAACTAGGACCGCTGCTTTAGAATATGAAGACTTCAATTCGGCTAAATCTCGCTTGATTGAACGTGCTGAGAAGTTCGGCGAAATCTCATACAAGGCTCGCAAAGTCATTGCAATGCTGAGTCAAGATTTTATATTTGATGGATGTACAATTTTAGTTCATGGTTTTTCCAGAGTTGTCTTGGAAGTTCTGCAATTGGCAGCACAGAATAAGAAGCTATTTCGGGTCTTCTGCACAGAGGGGAGACCAGACCGAACAGGTTTACGGTTGTCCAATGAGCTGGCCAAGCTCGATGTGCCTGTGAAACTTGTAATAGACTCTGCAGCGGCGTATAGCATGGATGAGGTGGACATGGTATTTGTGGGGGCAGATGGAGTTGTTGAAAGTGGCGGTATAATTAACATGATGGGCACATACCAAATTGCAATGGTTGCAAAGAGTATGAACAAGCCAGTTTATGTGGCTGCTGAAAGCTATAAGTTTGCTCGTCTTTACCCTCTGGACCAAAAGGATATGGCCCCTGCCTTACGCCCAGTTGATTTCGGTGTACCAATTCCATCCAAGGTTGAGGTTGAATGTTCTGCCAGGGATTACACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCCTCTGTTGTTAGTGATGAGCTCATCCAGCTATACTTATAG 954 0.5031 MAHFGAVTTDWLAQSASSAAINTHNPPLPPTTTTAAAAVSDAFSVIDEFNRWRKQPDLAEAVAAIRALAASWDTTSISLTAACDLFMRYVTRTAALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVLEVLQLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAAAYSMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARLYPLDQKDMAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2174 317 Pfam Initiation factor 2 subunit family 44 305 IPR000649 GO:0044237
Dod07g2174 317 Gene3D - 69 118 IPR042528 -
Dod07g2174 317 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 2 70 - -
Dod07g2174 317 SUPERFAMILY NagB/RpiA/CoA transferase-like 36 316 IPR037171 -
Dod07g2174 317 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 2 70 - -
Dod07g2174 317 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 71 317 - -
Dod07g2174 317 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 71 317 - -
Dod07g2174 317 Gene3D - 120 317 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2174 Dod-Chr7 53158131 53160561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2174 2 317 Eukaryotic Initiation Factors Gene Family AT1G53880 73.314 2.09e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2174 K03239 - pvy:116132660 509.99