Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2156 ATGGTGGAAGATCGAAAGCTGGTGCTGGTTTTGATCAGCACCTGCATTCTGTGTTTGATGGTTATTGGCATTTATGGTGACACAGATCCAAATGATGCTGCTGCTCTAAAGGTCATGTTTCAAAGTATGAACTCTCCATCCCAGCTAAATTGGCCTGTAGATGGTAACGATCCTTGTGGAAAACAGTCTTGGAAAGGCATTTCTTGCTCTGGAAACCGAGTAACCGAGATTAAGTTACCTGGTCTTGCACTAACTGGAAATTTCGGTTACCAGTTACAAAGCTTGACATCTTTGACCAACCTAGACTTGAGTAACAACAATCTTGGTGGCAGCATACCATACAGCCTTCCTCAAAATTTGCAGCGCTTAAATCTTGCTAATAATAATTTCAATGGGGGGATCCCTTATTCTATTTCTCAAATGACTTCTCTTACATACCTGAATCTTGGTCACAACCAGCTCCAGCAAGGACTGAATGTAGACTTTTCAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCTTTCAATTCCCTGACAGGTGACCTTCCTCAGACAATGAGCTCACTTTCAAGCATATCCACCATGTATCTGCAAAGCAACCAGTTTACAGGCACCCTCAATGTCCTTGCTAATCTGCCTCTTGATACTCTGAATGTGGAAAACAATCATTTTACTGGCTGGATACCAGAACAGTTGAAAAGCATAAACCTGCAGAAGGATGGTAATGCATGGAACTCAGGACCTGCACCTCCACCTCCTCCTGGGACACCTCCAATAACAAACGACCGCCATCACAAATCTGGTGGACATGGCTCCTCATCTGATGGGGGCACAAGTGGCGGGGACAAAAAATCTGGTATTGGAGAAATGAATTCTATGCAAACTTCTTCTGTAATTGACTTGAAGACATTTCATACTCCTGGGGAACCAATAAATGTTAAACCCCCCATTAAACCCCCACCTTTTGATCGTCATAAATCATTTGATGAGGATGAATTTCCAAAGAAACCTGCTGCTGTCAAGAAGACTGTAACAGCCCCTGCAAATGTGAGATCGTATTCTATAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTATATCGTGCTCAATTTGATGATGGAAAGGTTCTTGCAGTAAAGAAGATAGATTCATCTATCCTTCCCAATAATTCTTCTGATGATTTTACAGAAATAGTTTCAAACATCTCCCATTTGCATCATCCAAATGTGACAGAGCTTGTTGGATATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAATGGATCCCTACATGACTTCCTTCACCTACCTGATGAGCATAGTAAACCGTTGATATGGAATTCTCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCACGAAGTTTGTTCACCATCGGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATGCAGATATTAATCCTCATCTTTCAGACTCTGGACTGGCAAGCTATATTCCAAATGCAAACCAGGTATTGAACAATACTGCTGGATCTGGATATGATGCTCCTGAAGTTGGCTTGTCTGGTCAGTATACTTTTAAGAGCGATGTTTACAGCTTTGGCGTTGTCATGTTGGAACTTCTTAGTGGAAGGAAGCCATTTGACAGCTCAAGGCCAAGATATGAGCAGTCTTTGGTTCGATGGGCGACACCTCAACTTCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGGAAGGGCTATATCCTGTTAAATCTCTCTCTCGTTTTGCTGATGTTATTGCTCTCTGTGTTCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTTGTTCGCCTCGTGCAGCGAGCCAACATGAGCAAGAGGACAGCTGGAAATGATCAAGGAGGAACCCCAAGAGGGGGTGATGACCCCCAGACCCAAGACATGTAA 2013 0.4327 MVEDRKLVLVLISTCILCLMVIGIYGDTDPNDAAALKVMFQSMNSPSQLNWPVDGNDPCGKQSWKGISCSGNRVTEIKLPGLALTGNFGYQLQSLTSLTNLDLSNNNLGGSIPYSLPQNLQRLNLANNNFNGGIPYSISQMTSLTYLNLGHNQLQQGLNVDFSKLSSLSTLDLSFNSLTGDLPQTMSSLSSISTMYLQSNQFTGTLNVLANLPLDTLNVENNHFTGWIPEQLKSINLQKDGNAWNSGPAPPPPPGTPPITNDRHHKSGGHGSSSDGGTSGGDKKSGIGEMNSMQTSSVIDLKTFHTPGEPINVKPPIKPPPFDRHKSFDEDEFPKKPAAVKKTVTAPANVRSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSILPNNSSDDFTEIVSNISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEHSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDADINPHLSDSGLASYIPNANQVLNNTAGSGYDAPEVGLSGQYTFKSDVYSFGVVMLELLSGRKPFDSSRPRYEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTAGNDQGGTPRGGDDPQTQDM* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2156 670 Gene3D Ribonuclease Inhibitor 29 249 IPR032675 -
Dod07g2156 670 ProSiteProfiles Protein kinase domain profile. 365 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2156 670 PANTHER OS01G0253100 PROTEIN 315 667 IPR045271 GO:0004714|GO:0006468
Dod07g2156 670 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Dod07g2156 670 Pfam Protein tyrosine and serine/threonine kinase 367 637 IPR001245 GO:0004672|GO:0006468
Dod07g2156 670 MobiDBLite consensus disorder prediction 239 290 - -
Dod07g2156 670 Gene3D Transferase(Phosphotransferase) domain 1 444 657 - -
Dod07g2156 670 PRINTS Leucine-rich repeat signature 165 178 - -
Dod07g2156 670 PRINTS Leucine-rich repeat signature 98 111 - -
Dod07g2156 670 SUPERFAMILY Protein kinase-like (PK-like) 345 637 IPR011009 -
Dod07g2156 670 Pfam Leucine rich repeat 97 154 IPR001611 GO:0005515
Dod07g2156 670 SMART LRR_typ_2 95 119 IPR003591 -
Dod07g2156 670 SMART LRR_typ_2 141 164 IPR003591 -
Dod07g2156 670 SMART LRR_typ_2 165 189 IPR003591 -
Dod07g2156 670 Gene3D Phosphorylase Kinase; domain 1 330 442 - -
Dod07g2156 670 MobiDBLite consensus disorder prediction 647 670 - -
Dod07g2156 670 SUPERFAMILY L domain-like 29 232 - -
Dod07g2156 670 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 24 289 - -
Dod07g2156 670 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Dod07g2156 670 PANTHER OS01G0253100 PROTEIN 24 289 IPR045271 GO:0004714|GO:0006468
Dod07g2156 670 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 315 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2156 Dod-Chr7 52976886 52983188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2156 8 669 Strubbelig Receptor Gene Family AT1G53730 62.570 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dod07g2156 PK_Tyr_Ser-Thr 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2156 - - gmx:100780323 996.497