Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2155 ATGATCATGATGAGCAGCAACAACGTTGGACAATTTGGGGACACGACTCTGACCAAGGTGTTTGTTGGAGGGCTAGCCTGGGAGACTCCGAAGGAGGCACTCAAACAACACTTTGAGAAGTACGGTGAGATCCTTGAAGCTGTCATCATCTCCGACAAGCACACTGGCCGATCCAAAGGCTATGGCTTTGTGACCTTCAAGGAGGCAGAGGCAGCGAAGAAGGCCTGTGAGGACCAAGCAGCTCTCTTTATCAATGGACGCAGAGCAAACTGCAATCTTGCTTCCCTTGGAGCACGCCGCCCGAGGCCTTCTGCCACTGCTTCACCACCACCACAACCAAAAGAAGGATCAAACGGTGGAGGACCGAGGAACAACGCATCAAGCACAGCATCAGCTAATCACGTGCAGTGGTATTATCCAGTGGGAACACCTGCATCGCCATTCCATCCTCATCACCTTCACCACGCCCTTCCTTTCTATGGGTATAAGCTGAGCTACGGTGGGGCCTACATGAGTGGTGGGCACCATTTGTCCCATGTGTACCCGAGGCAGGCTATTGTGGGTGCCAACACATTGATGCCGACGTACCCTCTCTATCAGTATCGTCATCCAACGGAGACGATGGGCGTTCCTGCTCACTTCTTCCATCCAACGGTTGCGGGGCATTACGCTGCAGTGCCAGCTGGCATCGTTTCCAAGCCCGCACCCATCACTCCTCACACAGGTGCGTCACATGGTAACATGTCCAACGCAGTCAATTCAATTCTCTGCATTGGTCAAAAAAACAGTGTGTCACTCACGTGGCCAACTGATCGAGTTTGA 822 0.5292 MIMMSSNNVGQFGDTTLTKVFVGGLAWETPKEALKQHFEKYGEILEAVIISDKHTGRSKGYGFVTFKEAEAAKKACEDQAALFINGRRANCNLASLGARRPRPSATASPPPQPKEGSNGGGPRNNASSTASANHVQWYYPVGTPASPFHPHHLHHALPFYGYKLSYGGAYMSGGHHLSHVYPRQAIVGANTLMPTYPLYQYRHPTETMGVPAHFFHPTVAGHYAAVPAGIVSKPAPITPHTGASHGNMSNAVNSILCIGQKNSVSLTWPTDRV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2155 273 MobiDBLite consensus disorder prediction 96 129 - -
Dod07g2155 273 PANTHER GEO13361P1-RELATED 1 243 - -
Dod07g2155 273 CDD RRM_RBM24_RBM38_like 18 94 - -
Dod07g2155 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 96 IPR000504 GO:0003723
Dod07g2155 273 SUPERFAMILY RNA-binding domain, RBD 12 124 IPR035979 GO:0003676
Dod07g2155 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 87 IPR000504 GO:0003723
Dod07g2155 273 SMART rrm1_1 19 92 IPR000504 GO:0003723
Dod07g2155 273 Gene3D - 11 136 IPR012677 -
Dod07g2155 273 PANTHER RNA-BINDING PROTEIN ARP1-RELATED 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2155 Dod-Chr7 52958413 52962894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2155 14 162 C2H2 Transcription Factor Family AT2G19380 32.500 9.24e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2155 - - lang:109337745 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2155 07 52958413 52962894 Dod07g2155 07 52958413 52962894 ECH