Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2143 ATGGCTAGCATTAACAACACAATTCCAATACATGAATTCTTGCCAGTGGGATTCAGGTTCCGCCCTACAGATGAAGAGCTTGTTGGCCACTACCTCAAGCACAAGCTGCAGGGTGATGAATTCCCTGTCGTCGTCATCCCTGATATTGATCTTTGCAAGGTTGAGCCTTGGAACATACCAGGTAAGGTGATAGCCTTATCAGCGATAAAACCAGATGACCCTGAATGGTTTTTCTTCAGTCCACGTGATTACAAGTATGCAAGGAGCACAAGGTCTAACAGAAAAACAGAAGGTGGCTACTGGAAAGCCACTGGACAAGACAGGAACATCAGGGAAAGGGGAACAAAGAATGTGATTGGTTCCAAGAAGACACTTGTTTTCTATACTGGCCGCAGTACTCAAGGTGTCAAGACCAATTGGGTTATCCATGAATATCATGCAACTACCTTTGATGATAGCCAGAGGAAATTTGTCTTGTGTCGTTTAATGAAGAAAGCTGAGAAGAAAGCTGAAGGGGAAACTAATCCATTAGCCTATGATGAAGGGGAGCCTAGTGGCCACATGGCTTCTGACGTTGAATATCCAGCATCATCAGAAACAATTCCAAGAGTTCATGATTTGCCAGAAATGGATATGGATTTAGATTTAATGTTCCAACAACCACTTCAGGCCCCCTCATTACATCAATCTCCAATTAGCTTTGAGCAAGAAACATCCTTCCCAGTCTCCCCATCTCCCAATATCTATATTGGAAATGAAACTAGTAGCATGCATAATCCATTTGAAAATGCTGAAGAGAAGGATTATGCTTTAAACTTTGCAAATTCAGTTCTGGCTAACGAGAATTTCGATACCAATGAAGGAAGAGCGCAGGCCTTCATGGTTGGTTCTGCCAAGTCAGAGTCATTGAGAATGGTACACCATGAAAGCAGTGACACAGATGCTGAAGTAGTCTCTGCAAGGGTAAAGATAAATCCTCCAGACAATATTGGGGTTTGGTTCTGTACATTAATTGCTTTATGCATGGTGTGA 1032 0.4254 MASINNTIPIHEFLPVGFRFRPTDEELVGHYLKHKLQGDEFPVVVIPDIDLCKVEPWNIPGKVIALSAIKPDDPEWFFFSPRDYKYARSTRSNRKTEGGYWKATGQDRNIRERGTKNVIGSKKTLVFYTGRSTQGVKTNWVIHEYHATTFDDSQRKFVLCRLMKKAEKKAEGETNPLAYDEGEPSGHMASDVEYPASSETIPRVHDLPEMDMDLDLMFQQPLQAPSLHQSPISFEQETSFPVSPSPNIYIGNETSSMHNPFENAEEKDYALNFANSVLANENFDTNEGRAQAFMVGSAKSESLRMVHHESSDTDAEVVSARVKINPPDNIGVWFCTLIALCMV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2143 343 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Dod07g2143 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 295 - -
Dod07g2143 343 ProSiteProfiles NAC domain profile. 14 165 IPR003441 GO:0003677|GO:0006355
Dod07g2143 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 13 295 - -
Dod07g2143 343 Pfam No apical meristem (NAM) protein 15 146 IPR003441 GO:0003677|GO:0006355
Dod07g2143 343 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2143 Dod-Chr7 52882793 52884614 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2143 12 172 NAC Transcription Factor Family AT4G35580 57.229 2.03e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod07g2143 NAM 2.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2143 - - adu:107473112 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2143 07 52882793 52884614 Dod07g2143 07 52882793 52884614 ECH