Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2135 ATGATTCCTATTGTTGTCCTTCTTACTTCTTTTGTTACTATTGCTTTTGGAATTGTTGTGTCCTTGCCTCTCTCTTGTTCCCTCCAAGAGCAAGGAAAGCTACTACAACAAACACCTTTGCTTCCAAATTCTTGCAATGAAACATGTGGGAATCTTCATGTTCCTTTCCCATTCTATGTGAACACTTCTTGTGTGTCACTCGCCAGTTCTTTCCGCCTCTCTTGCACAAACTCCTCTGCCCTTTTGCTCAAAACTGGATCACAAAGCTACACAGTGTTGGAATTCTTCCCTGATGGCCTTTTGTTGGACTTTCCAGGCACATCATCATCATCATCATGTCGCCAGTACAATGACTTGAACTCATTTGGTGGAGCAAGTTTTGAAGGAAAAGATCACTTTGGAATCTCAGTTGAGAATGTTGTTGGCCTCTATGACTGTGATGATTCCTCTTTGTGCAAAGCAGATTGTGAAACAGTTGACCTTCCTGGCTGTGATGGAAGTGATGGTGGCTCCCTTGGATGCTGCTATCCACTGTCTGACCATAGCATATGGCACATTGGAGAAGGATTCTCAGTGTTCTCTCAGTTTGGTTGTAGGGGATTCTCTAGTTGGGCTGTTTTGAGAGGGTCTAATTCAGGAAAACGTGGGGTGAAGCTGGAATGGGCTATTCCCAGGAACTCCTCAAAGGGTGTTTGTGCAAATAATGCAGACATGATTAATGCTACAGCAGTTGAAGGTGGAGTGAGGTGTGTGTGTGAAGATGGATATGTTGGTGACGGTTTTGTTAATGGATCAGGATGCTTGCAATCGTGTATCAAGGATGGACAGGAAGCATATGGAAGCGACTGCAACATCAATAGACATGATCAAAAGAAAATGGTCATCATTGCAGGAATCCTTGGTCCAGTTCTTATTGTTGCATCCTTGATTGCACTATTTTACCTTCTTAAAAGACCAGCAAAACCGGGGATGTTTGACACTGATCATGAGCAGGCTTACTATCGCAACATTTCATTCCGGAAAGCTTGCAGAACTCGATTGTTCAGCCACCACGAGCTAGAAAGTGCCACCAATGGTTTTGAAGAGGGCAAGAAACTCATGCATGGTGCTACTGGGGCAATGTTTGCTGGAGTTCTTGGGGATGGATCTCACATAGCTGTCCACAAGCTAATATGTGAGAATGAGAGAGACATAATTCAAGTCCTGTCACAAATTGAGGTTCTATCTGCTATTGTCCATAGGAACATGGCCTCTCTTCTTGGATGCTGTATTGAATATGGCTACACTCCTCTAGTGGTGTATGAGTATCCTGCAAATGGTACCCTGCAGGAGCATTTACTCCAAATCAAAGGACACAAGATTAGTTTAGACTGGTATAGGAGATTGACCATTGCTGCAGAAACAGCTAGTATTGTTGCATTCTTACATTATGAGAACTCTCCTCCCATATTCCACAATAACCTCAAAACTAGCTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTTGGGCTACTTAATCCTGATTTCAATTATGAATCTCACTTGTACAAGAAGCAGGAATGCTTTCGAGTCTGCAAGAATGATGTCTGTGACATGGGTGTGGTGCTTCTTGAGATCATCTCAGGCTCAAACCACTTGGACTCACCAGCTTTAGCCTTGCAGAAAATAAGGGCTGGAAAGCTAGAAGAAATTGTTGATCCACTTCTTTCCTATCATGAACAGCCGCATTATCGCCAAGAGCAGATACAGATAATTGCAGACCTTGCAACAAGGTGCCTACTATTTGGTGCAGATGGAAAGGCTAGGAATGATTGA 1827 0.4313 MIPIVVLLTSFVTIAFGIVVSLPLSCSLQEQGKLLQQTPLLPNSCNETCGNLHVPFPFYVNTSCVSLASSFRLSCTNSSALLLKTGSQSYTVLEFFPDGLLLDFPGTSSSSSCRQYNDLNSFGGASFEGKDHFGISVENVVGLYDCDDSSLCKADCETVDLPGCDGSDGGSLGCCYPLSDHSIWHIGEGFSVFSQFGCRGFSSWAVLRGSNSGKRGVKLEWAIPRNSSKGVCANNADMINATAVEGGVRCVCEDGYVGDGFVNGSGCLQSCIKDGQEAYGSDCNINRHDQKKMVIIAGILGPVLIVASLIALFYLLKRPAKPGMFDTDHEQAYYRNISFRKACRTRLFSHHELESATNGFEEGKKLMHGATGAMFAGVLGDGSHIAVHKLICENERDIIQVLSQIEVLSAIVHRNMASLLGCCIEYGYTPLVVYEYPANGTLQEHLLQIKGHKISLDWYRRLTIAAETASIVAFLHYENSPPIFHNNLKTSCIFLDDDFSVKIAGFGLLNPDFNYESHLYKKQECFRVCKNDVCDMGVVLLEIISGSNHLDSPALALQKIRAGKLEEIVDPLLSYHEQPHYRQEQIQIIADLATRCLLFGADGKARND* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2135 608 Pfam Wall-associated receptor kinase galacturonan-binding 45 95 IPR025287 GO:0030247
Dod07g2135 608 SUPERFAMILY Protein kinase-like (PK-like) 343 598 IPR011009 -
Dod07g2135 608 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 54 597 IPR045274 GO:0007166
Dod07g2135 608 Gene3D Phosphorylase Kinase; domain 1 332 436 - -
Dod07g2135 608 Gene3D Laminin 231 262 - -
Dod07g2135 608 ProSiteProfiles Protein kinase domain profile. 360 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2135 608 Pfam Protein tyrosine and serine/threonine kinase 362 523 IPR001245 GO:0004672|GO:0006468
Dod07g2135 608 Gene3D Transferase(Phosphotransferase) domain 1 438 602 - -
Dod07g2135 608 PANTHER OS10G0351500 PROTEIN 54 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2135 Dod-Chr7 52758246 52761293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2135 45 604 Receptor kinase-like Gene Family AT2G23450 30.268 4.56e-63 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Dod07g2135 PK_Tyr_Ser-Thr 1.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2135 - - gmx:100810557 893.264