Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2134 ATGGCTTTGTTACGAGGTTTTGGCGCCGACGAGTTCGTTTTGGGAAGATCTGAAGCAGCGCTAGCTGCTCACCTTCCTGTGATGGACGCATACTCCTCTGGGGAAGAAGTGGTTATTAAGACAAGAAAACCATATACAATCACCAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAACAGGTTTCTAGAAGCTTTGAAGCTACATGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAAACTGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTGAAGGGTGTCCCAGCTGGACAAGCTCTTGACATAGAAATCCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGTAAGACCAGTGTTGGTGTCCCAGCATTGCATAGTGGAGCAAAGGATGGAAAACTCGGTTCTGTTGAAGCTTCTCATACTAAACAAGCACTACACTTGGAAAAAGAACCAGTTCCAGAGAAACATAATGGAGACAAAGGGTCAACAATTGTGAGAGAAAATAAGAATGGGCACTGCTCTATTAATGTTCTTCAGGAGGCACCCTGTTCCTCTGTATCTTCAGCAAACAAGAGCTCAATATCGTTGTCTGTGCCACTAAGAGATTCATGCGCCTTGAGGGAGATTATACCTTCAGTGAAAGAGGTAATATCACGAGATGAAACATATGGATCTTCTGTCACTATTGAACTTGAAAACCGGAAGTTGGAGGTAGATGATGGAAATCTGACTAATGGAAATAGAAAAGATTCCGAGTTGGAGAATTTTGATAAAGTGAAATTGGTTCAGAATGAGAAAACAGATGGTCTTAATTGTGCATTAACTATAGATGGTATACAAAGCAATCTGAATTATCCTAGACATGTTACTGTGCACGTGGTTGATGGGAACCTTGGAGCAAGTACTCAAAATCCATCCCAAGATATGTTGTTTCAGGAGTCCGTGTTCCAGCCACTAGGAGGGGTTAATGGACAACCTAATCTTTTCACCAATCCAACTGCATCAAACACAAGCGAAAGTCAATACAACACAACAAGATCTTCTGTCCATCAATCATTTCTTCCTTATTCTCCCTTCACACAACACAATCAAGATGATGATTACCAATCATTTCTTCACATGTCTTCCACATTCTCGAATCTCATTGTTTCTACCTTGCTGCAAAACCCCACAGCCCATGCTGCAGCAAGTTTTGCCGCAACTTTCTGGCCTTATGCAAATTCAGAAACTTTGGCAGATTCTCCTTCATGCTCCCAAGGAGGTTTTCCCCCTAGACAAAATGGCTCTCCTCCAAGTGTGGCGGCTATTGCGGCTGCTACCGTAGCAGCCGCAACGGCATGGTGGGCAGCCCATGGACTGCTTCCATTGTGTGCTTCACTCCATACTGCTTTTGCTTGCCCTCCTGCATCAATGACTGCAGTTCCATCAATGAATGCTGGTGAAGCACCAGTACCAGCACCAGCGCCCACACCAACAATGACAGAACAAGAAAAGAGTACTCTACATAATCCTCCTTGGCAGAATCAAAGACTTGATCCTGAATCCTCAGAAGCTCATCAAGCTCAACATTCAGCTTCTAAATCGCCAGCTGTTATCTCATCAGATTCTGAGGAGAGCGGGGATGCCAAGTTGAATGCTTCATCCAAGGCTACTGATCATGAGAAGAACAAAGCAATTTCCGAGCACCATGATTCCAACAAAACGGAAGGCAGAAAACTGGTTGACAGATCCTCATGTGGTTCCAACACAGCCTCTAGCAGTGAAGTGGAGACTGATGCATTAGAGGAGGATGAGAAAGGGAAGGAAGAGCCTGAAACACCTGATGCTAACCATTTAGCCACCGATTCCAGTAATCGTCGTAATAGAAGCCTTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAAGAGGGGCGACTGGCCTTTCAGGCTCTATTCTCCAGAGAAGTGTTGCCACAAAGCTTTTCACCTCCCCCTGATTTGAAAAACAAGGATCATGAAATGGACAGCACCAAGGATAACAATCAAATTGCAGATGACAAGGTCGAAGGCCATGACAGCATGAAATGCAGTTCTAATTGTGAAGGAATGCAGAAAAACATGCCAGTTGTAGACATTAATGAGGAGGAGGGACTGCTAACTGTAGGGCTCGGACAAGGAAAGCTCAAGACTCAACGAACCGGCTTCAAACCTTACAAGAGATGTTCAGTGGAGGCTAAGGAAAACAGGGTTGGAGCCAACCAAGGTGAAGAGAAAGGTTCTAAGAGAATACGCTTGGAAGGGGAGGCTTCAACTTGA 2352 0.4503 MALLRGFGADEFVLGRSEAALAAHLPVMDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPAGQALDIEIPPPRPKRKPSNPYPRKTSVGVPALHSGAKDGKLGSVEASHTKQALHLEKEPVPEKHNGDKGSTIVRENKNGHCSINVLQEAPCSSVSSANKSSISLSVPLRDSCALREIIPSVKEVISRDETYGSSVTIELENRKLEVDDGNLTNGNRKDSELENFDKVKLVQNEKTDGLNCALTIDGIQSNLNYPRHVTVHVVDGNLGASTQNPSQDMLFQESVFQPLGGVNGQPNLFTNPTASNTSESQYNTTRSSVHQSFLPYSPFTQHNQDDDYQSFLHMSSTFSNLIVSTLLQNPTAHAAASFAATFWPYANSETLADSPSCSQGGFPPRQNGSPPSVAAIAAATVAAATAWWAAHGLLPLCASLHTAFACPPASMTAVPSMNAGEAPVPAPAPTPTMTEQEKSTLHNPPWQNQRLDPESSEAHQAQHSASKSPAVISSDSEESGDAKLNASSKATDHEKNKAISEHHDSNKTEGRKLVDRSSCGSNTASSSEVETDALEEDEKGKEEPETPDANHLATDSSNRRNRSLSNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPPDLKNKDHEMDSTKDNNQIADDKVEGHDSMKCSSNCEGMQKNMPVVDINEEEGLLTVGLGQGKLKTQRTGFKPYKRCSVEAKENRVGANQGEEKGSKRIRLEGEAST* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2134 783 PANTHER PROTEIN LHY 29 767 - -
Dod07g2134 783 CDD SANT 53 96 IPR001005 -
Dod07g2134 783 MobiDBLite consensus disorder prediction 565 592 - -
Dod07g2134 783 MobiDBLite consensus disorder prediction 628 649 - -
Dod07g2134 783 MobiDBLite consensus disorder prediction 678 705 - -
Dod07g2134 783 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Dod07g2134 783 Pfam Myb-like DNA-binding domain 51 94 IPR001005 -
Dod07g2134 783 MobiDBLite consensus disorder prediction 160 184 - -
Dod07g2134 783 MobiDBLite consensus disorder prediction 593 607 - -
Dod07g2134 783 MobiDBLite consensus disorder prediction 114 184 - -
Dod07g2134 783 MobiDBLite consensus disorder prediction 759 783 - -
Dod07g2134 783 MobiDBLite consensus disorder prediction 510 564 - -
Dod07g2134 783 SMART sant 50 98 IPR001005 -
Dod07g2134 783 MobiDBLite consensus disorder prediction 666 705 - -
Dod07g2134 783 ProSiteProfiles Myb-like domain profile. 46 96 IPR001005 -
Dod07g2134 783 ProSiteProfiles SANT domain profile. 49 100 IPR017884 -
Dod07g2134 783 MobiDBLite consensus disorder prediction 495 651 - -
Dod07g2134 783 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 98 IPR006447 GO:0003677
Dod07g2134 783 PANTHER SWI/SNF COMPLEX-RELATED 29 767 - -
Dod07g2134 783 Gene3D - 53 100 - -
Dod07g2134 783 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 100 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2134 Dod-Chr7 52744852 52753946 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod07g2134 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2134 K12133 - gmx:100101859 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2134 07 52744852 52753946 Dod07g2134 07 52744852 52753946 ECH