Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2126 ATGGATGTTGTTGATGGTGGTGAGAAGAAGGATTCGATGATGAAGGAGACCGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATCATCAGAGAACGAAGAATGAAGATGACGGTGACTGGAGCGAGGAGGATGTGGTGGTGAAATGGGAGAGGTATCTGCCGCGGATGGTGGTGAGAGTGCTGTTGGTGGAAGCTGATCACTCTACTCGCCACATTATCACTGCTCTCCTTCGTAAATGCAGTTACTCAGTTACTGCAGTTTCTGATGGATTAAAGGCATGGGAGACCTTGCAGAGTAAAGCAACTGACCTAGATCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTCCTTACTTTAATCATGGAGCATAATGTTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAGTTAGCATGGTGTTGAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTACTAAACCTGTTCGGAGGAATGAACTTAGGAACTTGTGGCAGCATGTATGGAGAAGGCATGCTGCTACTAGCATGCCTCCTCAAAATACATCATTTCCACCTGAAATACCTACAATTGCTTCACAAGACAATTCTGCAAGCAATCAATCTAGTGGTTCTGTGGCTTCCTCGCAGAAAAATAATGAATGCGGTGAAAATTTGATTGAGGCTCAAAGTGCTTGTACATCACCATTTTTGAAAGTTGAGAATACACGTATGGAAAATATGCAGGAGGCATCCCAGCTGAAGAGTTCTTTGAACTTGAGCAACACTGTTGTAGTGCAGTATGAGAAGTATACTAAAATTGAAAGCAAGTCAGCTAAGCATAATGATGAAACAGGAGAGAGATCAGTTGCATTTGTATCAGAGGCTGCAAGCTGCAACAAAACTCTTAAATCAACAGATTTAAGGCTAGAACAAGACCATTGTTCTGCTGAAATGGAAAGCCAAGATGAAGTTTTAAGAGCTGAGTTAAGCAAAGCCAATTCTAATTGTAATACCAAGATTCATGGATGCAGTGATGTTGTTGGAAAACCTTCTAGAGCTATTGACTTGATTGCCACATTTGAGAATCTTGAAAAGCCTGCAAATGAAAACTGCAGTCTCAATGGTGGTAGCACTACCAAGTTTGATATTGATTCAAAATTGGAACTTACTTTAAGAAGAGGGTATTCTGACAGCTCATGTAAACAAGCAAGTGAGGTAACTGAGGAAAAGCAAATATTAAACCCATCAAATACTTCTGCCTTTTCTAGGTATAGTGGTAATAGTAAGTTGTTGCAGCCCCTTCTTTCAACACCATCGGTTAACTCTCCTACAGTAAACAGCATTGATTGGAATTCTCAGAAATCCCATAGATCATCTAGAAATTCGCTTGGTACTTCTTGTCAGTATAGTGGTACAGGAAAAAATCAGGGGAATATGACCACTCTGGTCCTTGGTGGACAGTTTGGACCAAAATTATCAACCAGTAAACGTGGACTCTTACCTGTTAATGGGGTCACTTCCGACATTAAGGCTGAAGGACATGGTAATGTTTTCACTTATGGGTCGTATGCACAATCTGGTGTTCATCCCATATGGAATCTGAAACCAGCCTGCCAGAAAGAGAGTTCTCCCTTTCCCACAAGTGCCTCCTCCCAGTCTAATCAAAGTTACAACTCAGAACAGCCCCATTGTCACTGGTCCAGCAATGCTGCTTACACTTCCCTTAATCAAAATGTAAAAGATAAAAGCAATTTGGATGATGTAGGGCATGATTCTTCAGCTGCTGGTCAGAGTGCTGGCAATAGTTTATGCCATGATGGTGCGAATCGTAATAACAGTAGTGCGCATGAAAGCATAGGCAGTGCAAGTGATGGAAATGCTACTTCAACTGTGGTGGCCAAGAACAACCCTGAAAACTTGAGTGATAGTGGTCGCCGTAATTATGATGGATTTAGAGGGACAAATTCCCAGCGCTCAAGTCAAAGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGGAAAGAGAGATGCTATGAGAAAAAGGTTCGATACCAAAGCAGGAAAACACTGGCAGACCAGCGCCCCCGAGTTAAAGGGCAGTTTGTGCGCCAAGTACAACATGATCATCCAGTAGCTGATGCCAGTGGTGATTCCTGA 2166 0.4201 MDVVDGGEKKDSMMKETVEEEEEEEEEEDHQRTKNEDDGDWSEEDVVVKWERYLPRMVVRVLLVEADHSTRHIITALLRKCSYSVTAVSDGLKAWETLQSKATDLDLILTEVELPSISGFALLTLIMEHNVCKNIPVIMMSSHDSVSMVLKCMLKGAADFLTKPVRRNELRNLWQHVWRRHAATSMPPQNTSFPPEIPTIASQDNSASNQSSGSVASSQKNNECGENLIEAQSACTSPFLKVENTRMENMQEASQLKSSLNLSNTVVVQYEKYTKIESKSAKHNDETGERSVAFVSEAASCNKTLKSTDLRLEQDHCSAEMESQDEVLRAELSKANSNCNTKIHGCSDVVGKPSRAIDLIATFENLEKPANENCSLNGGSTTKFDIDSKLELTLRRGYSDSSCKQASEVTEEKQILNPSNTSAFSRYSGNSKLLQPLLSTPSVNSPTVNSIDWNSQKSHRSSRNSLGTSCQYSGTGKNQGNMTTLVLGGQFGPKLSTSKRGLLPVNGVTSDIKAEGHGNVFTYGSYAQSGVHPIWNLKPACQKESSPFPTSASSQSNQSYNSEQPHCHWSSNAAYTSLNQNVKDKSNLDDVGHDSSAAGQSAGNSLCHDGANRNNSSAHESIGSASDGNATSTVVAKNNPENLSDSGRRNYDGFRGTNSQRSSQREAALTKFRLKRKERCYEKKVRYQSRKTLADQRPRVKGQFVRQVQHDHPVADASGDS* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2126 721 Coils Coil 16 38 - -
Dod07g2126 721 Pfam Response regulator receiver domain 61 172 IPR001789 GO:0000160
Dod07g2126 721 MobiDBLite consensus disorder prediction 593 667 - -
Dod07g2126 721 MobiDBLite consensus disorder prediction 543 567 - -
Dod07g2126 721 MobiDBLite consensus disorder prediction 17 31 - -
Dod07g2126 721 SUPERFAMILY CheY-like 60 184 IPR011006 -
Dod07g2126 721 MobiDBLite consensus disorder prediction 1 16 - -
Dod07g2126 721 ProSiteProfiles Response regulatory domain profile. 60 178 IPR001789 GO:0000160
Dod07g2126 721 MobiDBLite consensus disorder prediction 584 669 - -
Dod07g2126 721 Pfam CCT motif 665 707 IPR010402 GO:0005515
Dod07g2126 721 CDD psREC_PRR 61 164 - -
Dod07g2126 721 MobiDBLite consensus disorder prediction 441 475 - -
Dod07g2126 721 MobiDBLite consensus disorder prediction 1 41 - -
Dod07g2126 721 Gene3D - 57 336 - -
Dod07g2126 721 SMART REC_2 59 174 IPR001789 GO:0000160
Dod07g2126 721 MobiDBLite consensus disorder prediction 542 567 - -
Dod07g2126 721 PANTHER TWO-COMPONENT RESPONSE REGULATOR 52 259 IPR045279 GO:0009736
Dod07g2126 721 PANTHER TWO-COMPONENT RESPONSE REGULATOR 261 716 IPR045279 GO:0009736
Dod07g2126 721 ProSiteProfiles CCT domain profile. 665 707 IPR010402 GO:0005515
Dod07g2126 721 PANTHER PRR RESPONSE REGULATOR 52 259 - -
Dod07g2126 721 MobiDBLite consensus disorder prediction 185 221 - -
Dod07g2126 721 PANTHER PRR RESPONSE REGULATOR 261 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2126 Dod-Chr7 52593345 52599212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2126 648 709 Response Regulator Gene Family AT5G24470 70.312 6.68e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dod07g2126 Response_reg 3.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2126 K12130 - gmx:100791698 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2126 07 52593345 52599212 Dod07g2126 07 52593345 52599212 ECH