Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2122 ATGTCGCTAGGAGAGGTTGCTTGCAGCGACTCGCTCATGATCCTTCACGATGATAATGTCGCTGTCACTATCTCAACCTTGTTGAAAGCTGCAAAGATTGAAGTTGAATCTTACTGGCCAAGCTTGTTTGCTAAACTTGCCGAGAGGCGAAGCATTGAGGATTTGATATTGAGCTCCGGAGGTGGTGGGGCTCCGGATGCGGCTACAGCCCCCGCTGCAAGTGGTGACAGTGCTGCCCCTTCTCCTCCCCTGCCGAGGAGAAGAAGGTAG 270 0.5296 MSLGEVACSDSLMILHDDNVAVTISTLLKAAKIEVESYWPSLFAKLAERRSIEDLILSSGGGGAPDAATAPAASGDSAAPSPPLPRRRR* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2122 89 MobiDBLite consensus disorder prediction 58 89 - -
Dod07g2122 89 CDD Ribosomal_P1 5 63 - -
Dod07g2122 89 Pfam 60s Acidic ribosomal protein 23 80 - -
Dod07g2122 89 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 80 - -
Dod07g2122 89 Gene3D - 1 60 IPR038716 -
Dod07g2122 89 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2122 Dod-Chr7 52562451 52563542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2122 1 80 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 48.276 4.05e-23 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2122 K02942 - mnt:21402570 83.5741