Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2119 ATGCCGGAAAGCATGAGCATATCCGTGAATGGACAATCTCAAGTTCCTCCTGGCTTCAGGTTTCATCCAACCGAGGAAGAGCTTCTGCAATACTACTTGAGGAAGAAGGTCTGTTATGAGAAGATTGACCTCGATGTCATTCGCGATGTTGATCTCAACAAGCTGGAGCCATGGGACATACAAGAGAAGTGCAAGATAGGAACTACCCCACAAAACGATTGGTACTTCTTTAGCCACAAAGATAAGAAGTATCCAACCGGAACACGCACCAATAGAGCCACGGCTGCAGGGTTCTGGAAAGCCACCGGCCGTGACAAGGTGATATACAGTAACGGGAAGAGGATTGGAATGAGGAAGACCTTGGTCTTCTACAAAGGAAGAGCACCTCATGGCCAGAAATCTGATTGGATCATGCATGAGTATAGGCTAGATGACAACAACACCAATGATACCAATATTGTGTCCAATGTGATGGGGGATGCAGCACAAGAAGAAGGGTGGGTGGTGTGCAGGATATTCAAGAAGAAGAACCACCTCAAAACCCTAGACAGCCCCTTAGCCTCTTCCATCTCCGGGGAAGGGAGAAGGAGCCACTTGTTCGATTCATGCGATGAGGGAGCCTTGGAGCAGATACTTCAGCAAATGGGGAGTAGTAATAGGGGTTGCAAGGAAGAGAACAACAACTATGAATCCAACTACAGCTATGGAAGGTATGCAAGGCCTTTTGACACAACGATCATCAACAACAACAACAATGGTGGCGGTAATTACCATGAAAGGTTCTTGAAGCTCCCAAGCCTAGAGAGTCCTAAATCAACAAGCATGGAGAGCCAGCAAAATAATAATCACAATGATCACAATGATAACAATGATAATGGGTACCACCCCATTATCCCAGTTGACATGGTCACGGAAAATGAAGGGTCATTCACATGTGACAACCCCAACATGGTTCATCATCATCATCCATTGGATGCATCACCATCATCAATGGTGGTGGTAGGATCAGGTGGTGGTGGTGGACTTACAAATTGGGCAGCACTAGATAGGCTTGTTGCATCTCAGCTCAATGGCCAAACTGAGGCTTCTAGGCAATTGGCTTGCTTCAATGACCCCACCATAGGCTATTGCACTAGTGATCATGATCTTCAATTCCCCACCGTTCGATCATCATCATCATCTTCATCAACATCAACATCAAGGGCTGTTGCTACTTCTACTACTACTACTGCTGGTGCTTACATTAGTCCCACCACACAGGATTACAACACCAGCGAGATTGACCTGTGGAACTTTGCTAGATCCACATCTTCGTTATTGTCATCCTCTGAGCCACTGTGCCACGTGTCCAACACGTCAGTGTAG 1365 0.4637 MPESMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVCYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNNTNDTNIVSNVMGDAAQEEGWVVCRIFKKKNHLKTLDSPLASSISGEGRRSHLFDSCDEGALEQILQQMGSSNRGCKEENNNYESNYSYGRYARPFDTTIINNNNNGGGNYHERFLKLPSLESPKSTSMESQQNNNHNDHNDNNDNGYHPIIPVDMVTENEGSFTCDNPNMVHHHHPLDASPSSMVVVGSGGGGGLTNWAALDRLVASQLNGQTEASRQLACFNDPTIGYCTSDHDLQFPTVRSSSSSSSTSTSRAVATSTTTTAGAYISPTTQDYNTSEIDLWNFARSTSSLLSSSEPLCHVSNTSV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2119 454 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 9 400 - -
Dod07g2119 454 MobiDBLite consensus disorder prediction 269 295 - -
Dod07g2119 454 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Dod07g2119 454 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Dod07g2119 454 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Dod07g2119 454 SUPERFAMILY NAC domain 10 175 IPR036093 GO:0003677|GO:0006355
Dod07g2119 454 MobiDBLite consensus disorder prediction 269 287 - -
Dod07g2119 454 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 400 - -
Dod07g2119 454 MobiDBLite consensus disorder prediction 388 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2119 Dod-Chr7 52480981 52483464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2119 1 453 NAC Transcription Factor Family AT2G46770 52.700 1.26e-137 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod07g2119 NAM 7.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2119 - - ahf:112734309 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2119 07 52480981 52483464 Dod07g2119 07 52480981 52483464 ECH