Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2117 ATGGGGAAGAAGGGAAGTAGTTCATGGTTGACTGCTGTCAAAAGGGCATTCAGATCTCCAACAAAAGACAGTGACAAAAGGAGTGGCAGAAGAAGAGAGGACTATGATCAAGAAGAAGATGAAGAGAAGAAGAGAGAAAAAAGAAGGTGGATTTTCAGAAAAGCTGTGAATCTTGAAGCAGTGAACAACAACAACACTCAACAAAACACAACAACCAAGTTGAAGCAGCATCATCATGATGTGGCTGCAACAACAACAACAACAACAAGTGCTGGTGGTGCTTCAAGGGCAGACCAAGATCAGAAGCATGCTCTTGCAATGGCTGTGGCCACAGCTGAGGCTGCCATGGCCACTGCTCAAGCTGCAGTTGAGGTTGCAAGGTTGACAAAGCCTAGTTCTAATCATGCTAGGGAGCAGTATCGTGCTGCTGTTGTGATTCAAACAGCTTTTAGAGGATACCTGGCAAGAAGAGCACTTAGAGCACTTAAGGGGTTGGTGAAGTTGCAAGCTTTGGTAAGGGGTCACAATGTGAGGAAGCAAGCAAAGATGACCCTTAGATGCATGCAGGCGCTGGTTAGGGTGCAAGCAAGGGTCCTTGACCAGCGCATAAGATCCTCAATTGAAGGAAGCAGAAAATCCACCTTCAGTGACACTGGTAGCGTTTGGGAATTGCGGTATCTTCAAGACATCTCAGATAGGAAATCAGTATCAAGGGAGGGAAGCAGCATTGCAGATGATTGGGATGAACGTCCACACACAGTTGAAGAAGTGAAGGCCATGTTGCAGCAGAGGAAGGAAGCAGCTATGAAGAGGGACAAGTCCTTGTCTCAAGCTTTTTCCCAGCAGACTTGGAGGAATGGCAGGACTTCATCCATTGGAAATGAAGACGAGCTGGAAGAGAGGCCGAAATGGCTCGACCGGTGGATGGCGATGAAGCCATGGGAGAACAGGGGAAGAGCTTCAACTGATCAAAGAGACGCCATCAAGACTGTGGAAATTGACACCTCTCAGCATTACTCATATCTTGGAACCGGTTATAGAAGATCACACCCAAACTACCAGTATAACCCTCACCACCACCAACCTCAAAGGCATTCCATTGCTTCCCCACTCCACAGAACACACCAAAATGGATCCTTTCACCAGTCCCCTACCACCCCATCTCCAGGGAAATCAAGACCGATCCAAGTGAGGTCTGCGAGCCCTCGGTGTGTTAGAGAAGATAGAAGCTACCATACTTCTCAAACACCAAGCCTGAGGTCTAATTACCATTACACTGGTAGCTTGTGCCAAAATGGCAGGGCTGGAACAAGCAGTGGTGGTGGTGGTGGTACATTGCCTAATTACATGGCTGCAACCGAGTCTGCAAAGGCTAGGATCCGATCACAGAGTGCGCCGAGGCAGAGGCCGTCCACGCCAGAGAGGGACAGAGTTGGTTCTGCAAAGAAAAGGCTTTCTTTTCCTGCTCCTGATCCTTATAGTGTGGGAATGGGGTATGGAAATTATGGTCATAGTTTAAGGAGTCCAAGCTTCAAAAGTGTGAGTGCATCACATTTTGGGTTGGAGCAACAATCCAATTACTCTTCTTGCTGCACTGAGAGCCTTGGTGGTGAGATCTCTCCTTCTTCAACTGGTGACTTTAGAAGGTGGTTGAGGTAA 1659 0.4786 MGKKGSSSWLTAVKRAFRSPTKDSDKRSGRRREDYDQEEDEEKKREKRRWIFRKAVNLEAVNNNNTQQNTTTKLKQHHHDVAATTTTTTSAGGASRADQDQKHALAMAVATAEAAMATAQAAVEVARLTKPSSNHAREQYRAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSIEGSRKSTFSDTGSVWELRYLQDISDRKSVSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKSLSQAFSQQTWRNGRTSSIGNEDELEERPKWLDRWMAMKPWENRGRASTDQRDAIKTVEIDTSQHYSYLGTGYRRSHPNYQYNPHHHQPQRHSIASPLHRTHQNGSFHQSPTTPSPGKSRPIQVRSASPRCVREDRSYHTSQTPSLRSNYHYTGSLCQNGRAGTSSGGGGGTLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYSVGMGYGNYGHSLRSPSFKSVSASHFGLEQQSNYSSCCTESLGGEISPSSTGDFRRWLR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2117 552 MobiDBLite consensus disorder prediction 342 425 - -
Dod07g2117 552 SMART iq_5 138 160 IPR000048 GO:0005515
Dod07g2117 552 SMART iq_5 161 182 IPR000048 GO:0005515
Dod07g2117 552 MobiDBLite consensus disorder prediction 411 425 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 532 552 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 81 96 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 277 297 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 454 490 - -
Dod07g2117 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 183 IPR027417 -
Dod07g2117 552 MobiDBLite consensus disorder prediction 342 395 - -
Dod07g2117 552 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 552 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 1 46 - -
Dod07g2117 552 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Dod07g2117 552 Pfam Protein of unknown function (DUF4005) 401 502 IPR025064 -
Dod07g2117 552 MobiDBLite consensus disorder prediction 61 96 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 18 46 - -
Dod07g2117 552 PANTHER IQ-DOMAIN 5-RELATED 1 552 - -
Dod07g2117 552 MobiDBLite consensus disorder prediction 277 291 - -
Dod07g2117 552 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Dod07g2117 552 Pfam IQ calmodulin-binding motif 141 160 IPR000048 GO:0005515
Dod07g2117 552 Gene3D - 138 191 - -
Dod07g2117 552 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2117 Dod-Chr7 52438981 52442259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2117 1 552 IQD Protein Family AT1G01110 56.870 2.00e-178 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2117 - - adu:107472901 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2117 07 52438981 52442259 Dod07g2117 07 52438981 52442259 ECH