Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2110 ATGAGCAGCAACAAGAAGGAAGCGAGACCTCGTACCCGCGTTGGGAAGTACGAGCTTGGGAAGACCATTGGCGAGGGAAGCTTTGCGAAGGTCAAGTTCGCCAGGAACGTCGAGAATGGCGACCATGTTGCCATCAAGATCCTCGACAAGAACCACGTCCTACGCCACAAGATGATGGACCAGCTGAAGAAAGAGATTTCAGCGATGAAGATGATAAAACATCCAAACGTTCTCAAAATATTTGAGGTGATGGCAAGCAAAACAAAGATTTATATTGTCTTGGAGTTAGTTAATGGAGGAGAACTATTTGACAAAATTGCAACAAATGGGAGACTAAAAGAGGATGAAGCAAGAAGTTATTTTCAACAAATAATCAATGCAGTTGATTACTGCCATAGTAGAGGAGTGTATCACCGGGACTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGAGTACTAAAAGTTTCGGATTTTGGATTGAGTACATATGCACAACAAGAGGATGAACTCCTCCGCACTGCTTGTGGCACCCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGCTATGTTGGTTCTGCATCAGATATCTGGTCTTGTGGAGTCATTCTCTTTGTACTCATGGCTGGATACTTGCCTTTTGATGAGCCAAATCAAGCGGCACTTTACAAGAAAATTTTGAAGGCTGAATTCACATGTCCATCTTGGTTTTCGCCCGAGGCAAAGAAACTCCTGCAGCGTATTCTTGACCCAAACCCTCTTACAAGGATAAAAATTCCTGAACTCTTAAAAGATGAATGGTTCAAAAAGGGATACAAGCCACCATTTTTTACAGAGGAAGAGGATGTAAATACAGATGATGTAGCTGCTGCTTTTGATGATTCTAAGGAAAATCTTGTGACAGAGAGAAAAGAGAAACCCGTCTCGATGAATGCTTTCGAGCTCATTTCTAGATCGCAAAGCTTCAACCTTGACAGCTTGTTTGAGAAGCAGAAAGGAGTTGTAAAGAGTGAAACACATTTTACTTCACAGCGACCTCCAAATGAAATTATGTCCAAAATTGAGGAAGCTGCCAAGCCTCTCGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGCGATAAGAGTGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTACAGAAGTGGTTGAAGTCTTGTTGA 1203 0.4239 MSSNKKEARPRTRVGKYELGKTIGEGSFAKVKFARNVENGDHVAIKILDKNHVLRHKMMDQLKKEISAMKMIKHPNVLKIFEVMASKTKIYIVLELVNGGELFDKIATNGRLKEDEARSYFQQIINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVSDFGLSTYAQQEDELLRTACGTPNYVAPEVLNDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNQAALYKKILKAEFTCPSWFSPEAKKLLQRILDPNPLTRIKIPELLKDEWFKKGYKPPFFTEEEDVNTDDVAAAFDDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEKQKGVVKSETHFTSQRPPNEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVQKWLKSC* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2110 400 ProSiteProfiles Protein kinase domain profile. 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2110 400 PANTHER - 9 394 - -
Dod07g2110 400 Pfam NAF domain 309 369 IPR004041 GO:0007165
Dod07g2110 400 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Dod07g2110 400 CDD CIPK_C 313 393 - -
Dod07g2110 400 SMART serkin_6 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2110 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Dod07g2110 400 Gene3D Kinase associated domain 1, KA1 306 400 - -
Dod07g2110 400 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g2110 400 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Dod07g2110 400 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 9 394 - -
Dod07g2110 400 Gene3D Transferase(Phosphotransferase) domain 1 97 299 - -
Dod07g2110 400 SUPERFAMILY Protein kinase-like (PK-like) 14 303 IPR011009 -
Dod07g2110 400 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2110 Dod-Chr7 52363796 52369340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2110 1 393 CBL-interacting serine-threonine protein kinases AT1G01140 73.869 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod07g2110 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2110 - - gmx:100794136 715.301