Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2103 ATGGGTAGTGGAGAAAAGAGTCCAAGGAGCTTCATTTTGCATCGCCACCTTGTCCATCATCATCATCATCATGGTGATAATCATAATCACAAGCAAGGTCAGTTCATCAAGGATGTGATTCCAAAAGGGTGCATGGCAATTAAGGTTGGTCAAGGGGAGGAGCAACAAAGGTTTGTGGTTCCTGTGATATACTTCAATCACCCTCTCTTCATGCAGCTCTTGAAGGAGGCTGAGGAAGAATATGGTTTTGATCAGAAAGGGACCATAACAATTCCATGCCATGTTGAGGAATTCAGGAACATTAGGGGCTTGATTGATAGGGAAAAGTCCTTCCATCATCACCACCACCACCACCACCATGTTGGATGCTTTGGCTTTTGA 381 0.4436 MGSGEKSPRSFILHRHLVHHHHHHGDNHNHKQGQFIKDVIPKGCMAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNIRGLIDREKSFHHHHHHHHHVGCFGF* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2103 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 122 IPR003676 GO:0009733
Dod07g2103 126 PANTHER SMALL AUXIN-UP RNA-RELATED 36 122 - -
Dod07g2103 126 Pfam Auxin responsive protein 34 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2103 Dod-Chr7 52247562 52248494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2103 10 99 Calmodulin-binding Proteins AT5G20810 41.111 8.50e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2103 K14488 - pvy:116108881 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2103 07 52247562 52248494 Dod07g2103 07 52247562 52248494 ECH